PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03511.1.g00060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 236aa MW: 27122.7 Da PI: 8.6367 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 174.3 | 3.4e-54 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratk 79 lppGfrFhPtdeelv++yLk+kv+g ++el ++i+evd+yk+ePwdL k + ++++ewyfF +rd+ky++g r+nrat+ Zmw_sc03511.1.g00060.1.am.mk 6 LPPGFRFHPTDEELVNYYLKRKVHGLSIEL-DIIPEVDLYKCEPWDLAeKsFLPGTDSEWYFFGPRDRKYPNGCRTNRATR 85 79****************************.99**************84334555788*********************** PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +gyWk+tgkd++v +++ +g+kktLv+ykgrap+g +t+W+mheyr+ Zmw_sc03511.1.g00060.1.am.mk 86 AGYWKSTGKDRRVSY-QNRSIGMKKTLVYYKGRAPQGLRTNWIMHEYRI 133 **************9.8899***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.92E-58 | 4 | 142 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.219 | 6 | 150 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.0E-30 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MAPADLPPGF RFHPTDEELV NYYLKRKVHG LSIELDIIPE VDLYKCEPWD LAEKSFLPGT 60 DSEWYFFGPR DRKYPNGCRT NRATRAGYWK STGKDRRVSY QNRSIGMKKT LVYYKGRAPQ 120 GLRTNWIMHE YRIEESECDN TMGIQEVTAG VRTTAWTKNT SGRLDGRGIS HRSSASPHEQ 180 RHKCLAPSHV LDEMPEPEEG LEARCPHQCR NTPLAVTVGT SRYRYCNPAV ELKMPV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-52 | 2 | 133 | 11 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor directing sieve element enucleation and cytosol degradation. Not required for formation of lytic vacuoles. Regulates, with NAC045, the transcription of NEN1, NEN2, NEN3, NEN4, RTM1, RTM2, UBP16, PLDZETA, ABCB10 and At1g26450. {ECO:0000269|PubMed:25081480}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008653036.1 | 1e-104 | NAC domain-containing protein 45 | ||||
Swissprot | Q9FFI5 | 2e-78 | NAC86_ARATH; NAC domain-containing protein 86 | ||||
TrEMBL | A0A1D6IAU5 | 1e-102 | A0A1D6IAU5_MAIZE; NAC domain containing protein 57 | ||||
TrEMBL | A0A3L6E437 | 1e-102 | A0A3L6E437_MAIZE; NAC domain-containing protein 86 | ||||
STRING | Sb02g032230.1 | 1e-103 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3713 | 38 | 79 |
Publications ? help Back to Top | |||
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