PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03504.1.g00080.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 309aa MW: 34353.9 Da PI: 8.937

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03504.1.g00080.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.9	1.2e-14	234	276	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+kv L++eN++Lk Zmw_sc03504.1.g00080.1.sm.mkhc 234 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLQEENERLKR 276 79*************************************9995 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.3E-10	230	301	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.611	232	277	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.31E-11	234	281	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.8E-14	234	278	No hit	No description
CDD	cd14707	3.46E-25	234	279	No hit	No description
Pfam	PF00170	2.7E-12	234	276	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	237	252	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MQRLARQGSL YNLTLDEVQS HLGEPLHSMN LDELLKSVFP DGLDPDGATT SEHEQASGLL 60 RQASISMPPE LSKKTVDEVW KGIQDGPKRN AEEGSRRRRE RQPTLGEMTL EDFLVKAGVV 120 TEGYLKDLND VGNVDQVGMA GAACLTRGAQ WLDQYQQQFT AIDAHQHGQH SIPGAYMLSR 180 LALQPLNVVP SAIVESAYSN GNITSPMMGT LSDSPTPVRK RGATGDVADK LMERRQKRMI 240 KNRESAARSR ARKQAYTNEL ENKVSRLQEE NERLKRQKHS IIRIVINDGP KGLSMREILM 300 QSNALAFAV

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025818579.1	1e-171	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
Swissprot	Q9LES3	4e-66	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A3L6SJ47	1e-170	A0A3L6SJ47_PANMI; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRING	Pavir.Eb03523.1.p	1e-169	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]