PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03462.1.g00060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 235aa MW: 25870.7 Da PI: 4.5377 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.2 | 1.2e-17 | 9 | 55 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 lppGf FhP+d el+++yLk+kv+g+++e + i+evdiyk+ePwdLp Zmw_sc03462.1.g00060.1.am.mkhc 9 LPPGFGFHPSDAELISHYLKRKVHGQRIEY-DLIPEVDIYKHEPWDLP 55 79***************************9.99**************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.06E-27 | 3 | 95 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 15.455 | 9 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-6 | 10 | 52 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence Send to blast |
MEALRAMRLP PGFGFHPSDA ELISHYLKRK VHGQRIEYDL IPEVDIYKHE PWDLPCRPPS 60 GKRTEWIMHE YYIDENECRV SPDMKDAFVL CRVTRRDEWA LENDSGVGNR NPHPQNSNDT 120 AAFVPAEKQE DHATSVVIAK TQEAAGASVV IAKKQEDAAT SGNCAGEANH AGTPVSAELS 180 NDIVQTAFMG RFPNSDSELQ ALMEELADLS SKPAVDTDSA GLSLIGQDFE SSVCS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-15 | 7 | 68 | 13 | 73 | Stress-induced transcription factor NAC1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by salt and cold stresses. {ECO:0000269|PubMed:18813954}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021312344.1 | 4e-60 | NAC domain-containing protein 74 | ||||
Swissprot | Q7GCL7 | 8e-41 | NAC74_ORYSJ; NAC domain-containing protein 74 | ||||
TrEMBL | A0A1E5W8C0 | 2e-62 | A0A1E5W8C0_9POAL; NAC domain-containing protein 74 | ||||
STRING | Sb03g010130.1 | 1e-59 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7560 | 38 | 47 |
Publications ? help Back to Top | |||
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