PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03455.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 238aa MW: 26038.2 Da PI: 6.5187 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 34.5 | 5.9e-11 | 12 | 124 | 2 | 126 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 ppG+ F+Ptdeel++ yL ++++g+ l v i++ +++Pw+L F +r ++ r +r g Zmw_sc03455.1.g00010.1.am.mk 12 PPGLIFDPTDEELIMLYLLPRTRGQADALPGViIDDDAAANAQPWKL-------------FPERPPHA---PRGRRCDGGG 76 8*************************888777588888999******.............44454444...4788888999 PP NAM 82 yWkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmhey 126 Wk + + ++ ++ +++ ++k+ L + +g+ t Wvm+e Zmw_sc03455.1.g00010.1.am.mk 77 SWKIQKRGRKDAARhvlrvsGESIRWTKNKLKLS---VGTGTTTGWVMQEH 124 **96665443333334555666778999999998...556778******96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.8E-18 | 10 | 139 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 15.239 | 11 | 168 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.2E-10 | 12 | 124 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MLVAKLFGDD HPPGLIFDPT DEELIMLYLL PRTRGQADAL PGVIIDDDAA ANAQPWKLFP 60 ERPPHAPRGR RCDGGGSWKI QKRGRKDAAR HVLRVSGESI RWTKNKLKLS VGTGTTTGWV 120 MQEHFVDDLP SLRVCRISFA GRGEKRPRLQ PDDSSVPGEP VTRRLRVVAA AADSGSANCT 180 TTSLDHQKPG TADASEGQER RQSALGVAAM PNQEIQDSFG KIQEFTDALE DDEEPHGS |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8717 | 9 | 46 |