PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03406.1.g00030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 292aa MW: 31433.3 Da PI: 5.648 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 86.9 | 1.7e-27 | 141 | 199 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YY+C+s C+++k ver+ e p+v+++tY geH h Zmw_sc03406.1.g00030.1.sm.mk 141 TDLWAWRKYGQKPIKGSPYPRGYYKCSSMrACMARKLVERNPEKPEVLIVTYIGEHCHA 199 699***********************9988**************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 29 | 135 | 201 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.6E-27 | 136 | 201 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.45E-24 | 138 | 201 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.8E-32 | 140 | 200 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.1E-23 | 142 | 198 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence Send to blast |
MEPSNDWDLQ AVVRSCGAAA SSSSSSSGAA EPRSAVAPPR HKEAAGPIVD AGSESFLGRP 60 AATMRGLEYL NLDHVLPFSI TPTSGERAHG NEVLISFPAA STSGQSKKQA GRNAPRPKKS 120 KKSQLKKVVC EVPVADGGVS TDLWAWRKYG QKPIKGSPYP RGYYKCSSMR ACMARKLVER 180 NPEKPEVLIV TYIGEHCHAV PTMLNSLAGT TRHKPPSPDQ HSLQMSDEAC PMIVDGGAAE 240 TPDDESNLWP VDMSLLDEYP LDDFLAGPFD DDVGVSLEDQ DEQDGLGRRM SL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 4e-17 | 122 | 202 | 2 | 80 | Disease resistance protein RRS1 |
5w3x_D | 4e-17 | 122 | 202 | 2 | 80 | Disease resistance protein RRS1 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025809273.1 | 1e-110 | WRKY transcription factor 22-like | ||||
TrEMBL | A0A3L6SXR1 | 1e-115 | A0A3L6SXR1_PANMI; WRKY transcription factor 22-like | ||||
STRING | Pavir.J36501.1.p | 1e-109 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4279 | 30 | 70 |