PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03378.1.g00100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 264aa MW: 29158 Da PI: 6.2873 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 44.1 | 4.7e-14 | 56 | 94 | 1 | 39 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvk 39 ++rlrWt++LHerFveav+qLGG++k ++i e++k++ Zmw_sc03378.1.g00100.1.sm.mkhc 56 RQRLRWTNDLHERFVEAVTQLGGPDKIQASKISEALKLQ 94 58************************9999999988765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 5.91E-5 | 55 | 91 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 5.9E-12 | 55 | 93 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 8.5E-10 | 57 | 93 | IPR006447 | Myb domain, plants |
Pfam | PF14379 | 1.4E-23 | 86 | 130 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence Send to blast |
MFFFPAEERA MHSTKPEASF GQAHTDSVIN QQQMVLAGND MGPSNGANSN TNMAARQRLR 60 WTNDLHERFV EAVTQLGGPD KIQASKISEA LKLQMEVQKR LHEQLEVQRQ LQLRIEAQGK 120 YLEKIIEEQR RFSGVKPEMP LAGASVTVSS NEQFPDSERT EPSTPAPKSE SPTQGASNRD 180 NGGRTEAPKS PCHDDSLSHH EPLTPDSNHQ PGSPTASPNH ERAAKRQRAS STEFSQGDCS 240 LTGHIFESSS GSEFQQYSMS YSGH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001152613.1 | 1e-108 | MYB-CC type transfactor | ||||
Refseq | XP_023156307.1 | 1e-108 | MYB-CC type transfactor isoform X1 | ||||
Swissprot | Q9SJW0 | 4e-39 | PHL7_ARATH; Myb family transcription factor PHL7 | ||||
TrEMBL | A0A1D6I1M9 | 1e-123 | A0A1D6I1M9_MAIZE; Myb family transcription factor PHL7 | ||||
STRING | GRMZM2G173943_P02 | 1e-108 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2220 | 38 | 96 |