PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03377.1.g00020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 174aa MW: 19186 Da PI: 10.3045 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.1 | 1.7e-27 | 19 | 70 | 2 | 53 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 pr+rWt eLH +F++a+e LGG++kAtPk il++m+ kgLt++hvkSHLQk Zmw_sc03377.1.g00020.1.sm.mk 19 PRMRWTAELHGSFLRAIECLGGQDKATPKLILRFMGAKGLTISHVKSHLQKL 70 9*************************************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 5.2E-26 | 15 | 74 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.15E-15 | 16 | 75 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.7E-21 | 19 | 70 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.9E-7 | 20 | 71 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence Send to blast |
MGSGGRNGAV RRYIRSTEPR MRWTAELHGS FLRAIECLGG QDKATPKLIL RFMGAKGLTI 60 SHVKSHLQKL KAWYNRKKRT KTGTEAAYKG MQGSQGISGM RTAGNQYCMH DYMQAMAMEE 120 RIKQEGLRWQ SDAAAAAAAP APAVSSLQTV GCLVQESGSF KLHHLSLTDE EDLQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-16 | 20 | 71 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-16 | 20 | 71 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 2e-16 | 20 | 71 | 3 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-16 | 20 | 71 | 3 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-16 | 20 | 71 | 3 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-16 | 20 | 71 | 3 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-16 | 20 | 71 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-16 | 20 | 71 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-16 | 20 | 71 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-16 | 20 | 71 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-16 | 20 | 71 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-16 | 20 | 71 | 4 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006652650.1 | 3e-63 | PREDICTED: uncharacterized protein LOC102700890 | ||||
TrEMBL | J3M0G9 | 6e-62 | J3M0G9_ORYBR; Uncharacterized protein | ||||
STRING | OB04G28940.1 | 1e-62 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2966 | 35 | 83 |