PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03372.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 337aa MW: 36871.7 Da PI: 8.3293

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03372.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27.7	6e-09	118	157	4	43
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 kr +r NR +A+rsR RK+++i eLe+ v +L+++++ Zmw_sc03372.1.g00050.1.am.mk 118 PKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQQQRR 157 5999*******************************99985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.0093	115	168	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.829	117	158	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.6E-9	119	157	No hit	No description
SuperFamily	SSF57959	8.04E-9	119	158	No hit	No description
Pfam	PF00170	4.2E-7	119	155	IPR004827	Basic-leucine zipper domain
CDD	cd14703	4.14E-17	120	153	No hit	No description
PROSITE pattern	PS00036	0	122	137	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence Send to blast
MQCVASWLRL SSCSKSLVPC DPPISVAPAD GGAGEFDRLD DDQLMSMFPD EGGSASAPGS 60 ENGGSDSDGR DKRPAAAAVG AGKECDDERN GNVVAKEPVP GQDAAATVAA PTELIRDPKR 120 VKRILANRQS AQRSRVRKLQ YISELERSVT TLQQQRRERA PMCVRGVEPW RPAPFAWQPR 180 DATHLASSSP EVVVGSSSSR VPSPVHVRCL YPRMRCEREC ESEVSPWSGL RFTCPGRMLV 240 LFPATDTSNE VSVLSPRVAF LDQQRTILTV GNSHLKQRIA ALAQDKIFKD AHQEALKKEI 300 ERLRRVYEQQ NLKMSAGAPA SEHGPPPPVR AEKELMS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription regulator. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002456373.1	9e-52	basic leucine zipper 6
Swissprot	Q5JMK6	4e-45	BZP06_ORYSJ; Basic leucine zipper 6
TrEMBL	A0A0E0JNV1	6e-66	A0A0E0JNV1_ORYPU; Uncharacterized protein
STRING	OPUNC01G30390.1	1e-66	(Oryza punctata)

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]