PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03309.1.g00110.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 798aa    MW: 85298.8 Da    PI: 9.5979
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03309.1.g00110.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31e-19619670256
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                   +y+GVr+++ +g+++AeIrdp+++g   r++lg+++ta eAa+a+++a+ +++g+
  Zmw_sc03309.1.g00110.1.am.mk 619 KYRGVRQRP-WGKYAAEIRDPKKRG--SRVWLGTYDTAVEAARAYDRAAFRMRGA 670
                                   8********.***********8876..**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.7E-32618678IPR001471AP2/ERF domain
SuperFamilySSF541714.05E-22619678IPR016177DNA-binding domain
CDDcd000188.21E-29619678No hitNo description
PROSITE profilePS5103224.223619677IPR001471AP2/ERF domain
SMARTSM003804.5E-39619683IPR001471AP2/ERF domain
PfamPF008471.9E-13619669IPR001471AP2/ERF domain
PRINTSPR003678.0E-13620631IPR001471AP2/ERF domain
PRINTSPR003678.0E-13659679IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 798 aa     Download sequence    Send to blast
MGNKVFCSCC SPSPSNSGYL AAGMDRWTGV VHVPLSRGGP LSRVAASLIL SPTKTLAVRL  60
PPSALLAFGF FPFVPRANAI LFTGDRVRGT GDPTIERLSD AVHLAGVLAG KLSGETNAWV  120
IDAARFSGSF AVYRELVPSV DAAGDPKGYE PTGFPAAAGV ASLLAHGIGE AFQLVLLRLA  180
TKLDWGLARR TESNPRNTVG FRPRARPALV WLDSRAVLTR FSTALASIFS GARGPSARRW  240
PLLGKKGVAR CGESSPATLP RALSCGNWEP RNEKNAYALR RVDQQPVRGQ SFAAAGVTVA  300
SAVLVETMPE IRVTYVLCIQ GPHAREPIDR ALPAASKRCT VSINRRLPAT SAVEKVLEDD  360
GRGVGSGGVT EKLRRCSRLL HAVFVRVEAQ PTTTAKDQMN TVTRVNEPSI SARDRSPSVA  420
RQLTAGAAVR GGAGQQQALD AGPDFVWPRV GLATFRYFAA RVNWVCIGEQ SMYWPPPRDM  480
DFSGEGDDFW LQIIREQCYA GEACLPVPET YAASSAVAPP AQQAYQHTAF TLQQQQQQQV  540
ALVDLTHGYA DAAAAAAAFQ AAEPAAPLMI RFGGEPSPRP SLTISLPPTS LAWGTDVVAP  600
LPAHSAAGAA VADVDDFRKY RGVRQRPWGK YAAEIRDPKK RGSRVWLGTY DTAVEAARAY  660
DRAAFRMRGA KAILNFPNEV GSLGADFLAT PPQHAARSPN KRKLRDDAQT DVEPAAKSVK  720
TETLTSPASS QTTSLSPATT AASTVTSLSS SEAAGAHEEW LPMTPSSWAW EQFESMFESL  780
PPLSPHPGQM GFSEVIVN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-26618682468ATERF1
3gcc_A5e-26618682468ATERF1
5wx9_A1e-256196791474Ethylene-responsive transcription factor ERF096
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465