PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03297.1.g00030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 936aa MW: 102317 Da PI: 9.194 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.1 | 2.5e-51 | 100 | 229 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknrat 78 +ppGfrFhPtdeel+ +yLkkk+ +k++l evi+evd++k+ePw+L++ ++ + ++ewyfFs++d+ky+tg+r+nrat Zmw_sc03297.1.g00030.1.am.mk 100 VPPGFRFHPTDEELLLYYLKKKIGFEKFDL-EVIREVDLNKIEPWELQErcRIGSaPQNEWYFFSHKDRKYPTGSRTNRAT 179 69****************************.99**************963433332566********************** PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++g+Wkatg+dk + + + +++g++ktLvfy+grap+g+ktdW+mhe+rle Zmw_sc03297.1.g00030.1.am.mk 180 TAGFWKATGRDKCIRT-SYRKIGMRKTLVFYRGRAPHGQKTDWIMHEFRLE 229 ***************9.8999***************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.45E-59 | 91 | 251 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 57.334 | 100 | 251 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.7E-26 | 101 | 228 | IPR003441 | NAC domain |
Gene3D | G3DSA:3.20.20.70 | 2.9E-138 | 572 | 930 | IPR013785 | Aldolase-type TIM barrel |
SuperFamily | SSF51395 | 6.64E-121 | 572 | 929 | No hit | No description |
CDD | cd02933 | 8.29E-174 | 572 | 911 | No hit | No description |
Pfam | PF00724 | 2.0E-83 | 573 | 907 | IPR001155 | NADH:flavin oxidoreductase/NADH oxidase, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0010181 | Molecular Function | FMN binding | ||||
GO:0016491 | Molecular Function | oxidoreductase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 936 aa Download sequence Send to blast |
MAARPSYHAL ALIAIKRSVN KVRVEASGSL TGRRIWQLTE LPARARMAVP CVLRDHLLSP 60 STAAAAGVNS SRPRPPPPPR SCGSRGKGVV MAVFSSSNGV PPGFRFHPTD EELLLYYLKK 120 KIGFEKFDLE VIREVDLNKI EPWELQERCR IGSAPQNEWY FFSHKDRKYP TGSRTNRATT 180 AGFWKATGRD KCIRTSYRKI GMRKTLVFYR GRAPHGQKTD WIMHEFRLEE ADDAQGGTSE 240 DGWVVCRVFK KKCFFKIGGG GEGSASQGAD AGGHLAASPP LGGHQSVLAS HYIHPHHQYY 300 HAASSYYSQM QVPAAYSHQV QVQDLLTNHR PTADAAGYDF SGLPVEHPAA AGGLDVGSSD 360 GVAADGAQME GRDQASGAAE QQWQAIDGFG NGAGNGAVQQ MTGAMSSGQR GGEMDLWGYG 420 SANEVRELVT RTEHPDAHSD GHGLWCSASE RPAGLVRRSR LRAFAIRRPR GTVTAHRHPI 480 HADTAQKKVG RMRGDPGDLW RCVVAERGQL GRLGSWLPRP KLHGCTFLRR REVERPCSVH 540 AVSVVGRSPK PRSRMGDDRH AVTGSEQTKA IPLLTPYKMG RFQLSHRVVL APLTRQRSFG 600 CVPQPHAAVY YAQRATQGGF LIAEATGVSH AAQGYPDTPG LWTREQVEAW KPVVDAVHAK 660 GGVFFCQIWH TGRASNYEFQ PNGQAPVSST DRQVAPKESA DGLSVTSYAV PRRLRTDEIP 720 AIVDDFRIAA QNAIEAGFDG VEVHAAHGYL IDQFLKDGVN DRTDEYGGSL ANRCRFALEV 780 VAAVAAEIGA DRVGVRVSPY TDYMDATDSD PDALGAHVAR ALGELGVLYL HAVEPRMLRP 840 TERGETRHSL RPMRDAFGGT FVVAGAYALE DGSRAVADGY ADLVAYGRLF LANPDLPRRF 900 ALDAPLNKYD RKTFYTPDPV IGYTDYPFLG GDDLSK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1vji_A | 0.0 | 566 | 929 | 5 | 368 | 12-oxophytodienoate reductase (OPR1) |
2q3r_A | 0.0 | 566 | 929 | 5 | 368 | 12-oxophytodienoate reductase 1 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0D9W5F8 | 0.0 | A0A0D9W5F8_9ORYZ; Uncharacterized protein | ||||
STRING | LPERR04G10720.1 | 0.0 | (Leersia perrieri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9297 | 30 | 46 |