PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03277.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 598aa MW: 64578.8 Da PI: 10.191

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03277.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	105.6	2.8e-33	357	411	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprCds ntkfCyynnyslsqPryfCk+C ryWtkG +lrnvPvGgg+rkn++ Zmw_sc03277.1.g00040.1.am.mk 357 PSCPRCDSPNTKFCYYNNYSLSQPRYFCKGCCRYWTKG-SLRNVPVGGGCRKNQRG 411 58********************************95.9***********986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	8.0E-26	344	410	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	25.304	357	410	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.2E-27	358	410	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 598 aa Download sequence Send to blast
MKHPLSSAAG LPSFFLGLGL SGHRSIGRPL PRLFMPFMRE RRRSDGGRGV QAKERVGRTQ 60 LMYERFGHLD HVDPASNPDH HRIVAAVGSS SELGELGSRV GCAHWPWRAE SITCSSVYNG 120 SVPVRSPVKR HGVRWFTGTA SACPGPFGTD GLTHVARPCA AWFSAAARRP PGVKRTASAP 180 TGTLPPHRPE LSSFHRRSHP TTTSSRAVPT ASHARASVSH SSNARESRWH GLEAGRCRAV 240 SVLAGSHKRK ARNHARRVHQ SSRRRAATLM GHASPPRSRV AFYRRTSHLA SSHRCPCIVI 300 TSLHRSDRSS PPINQATGPG QMLSSRCDNM LPPYAGGARR AVPLDHRRYR PNVEVAPSCP 360 RCDSPNTKFC YYNNYSLSQP RYFCKGCCRY WTKGSLRNVP VGGGCRKNQR GKSARSTLAA 420 AAASGGAAAF SGRGTVRPDL ILEGMVGNQP VSDDKPVVAG RSAIDLALLY AEFLKPQPPP 480 GEQCPAEPES VDTSSGSSSG MSPKPQAGSA LLEPRWCPDA RGEELSFSVD QSCYDSLGLP 540 TDGGDLILPS TWCHESKYEL FDPLPEDAMS LHDSIAGADD VWSNAFACQG LEAALCRP

Sequence ? help Back to Top

Protein Sequence Length: 598 aa Download sequence Send to blast

MKHPLSSAAG LPSFFLGLGL SGHRSIGRPL PRLFMPFMRE RRRSDGGRGV QAKERVGRTQ  60
LMYERFGHLD HVDPASNPDH HRIVAAVGSS SELGELGSRV GCAHWPWRAE SITCSSVYNG  120
SVPVRSPVKR HGVRWFTGTA SACPGPFGTD GLTHVARPCA AWFSAAARRP PGVKRTASAP  180
TGTLPPHRPE LSSFHRRSHP TTTSSRAVPT ASHARASVSH SSNARESRWH GLEAGRCRAV  240
SVLAGSHKRK ARNHARRVHQ SSRRRAATLM GHASPPRSRV AFYRRTSHLA SSHRCPCIVI  300
TSLHRSDRSS PPINQATGPG QMLSSRCDNM LPPYAGGARR AVPLDHRRYR PNVEVAPSCP  360
RCDSPNTKFC YYNNYSLSQP RYFCKGCCRY WTKGSLRNVP VGGGCRKNQR GKSARSTLAA  420
AAASGGAAAF SGRGTVRPDL ILEGMVGNQP VSDDKPVVAG RSAIDLALLY AEFLKPQPPP  480
GEQCPAEPES VDTSSGSSSG MSPKPQAGSA LLEPRWCPDA RGEELSFSVD QSCYDSLGLP  540
TDGGDLILPS TWCHESKYEL FDPLPEDAMS LHDSIAGADD VWSNAFACQG LEAALCRP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2659	36	83