PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03262.1.g00080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | FAR1 | ||||||||
Protein Properties | Length: 187aa MW: 19294.7 Da PI: 7.5744 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 23.6 | 1.7e-07 | 65 | 114 | 43 | 90 |
FAR1 43 eekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 e+kk+ +e + + +rtgC a+l++k+ ++vt + +eHnH+la Zmw_sc03262.1.g00080.1.am.mk 65 EHKKSqDEAAGPLCPDSRTGCLASLTIKLIPsAYAFRVTGFITEHNHPLA 114 44444123333456789*************98999*************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 3.5E-5 | 61 | 114 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MSTAPDPSHF SGGSSQSSPT SSGSSSPSSG AAELAATNLK QVVLTSAAED EADVAPTSPR 60 GFVQEHKKSQ DEAAGPLCPD SRTGCLASLT IKLIPSAYAF RVTGFITEHN HPLASAAPAV 120 SLALLLRCYQ SHHTTALVPL RACQTLRMAH TPTCTLGPRS MHMSFTTGTL STLDSVFVAP 180 TRSASVG |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP35145 | 2 | 2 |