PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc03242.1.g00050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 88aa MW: 9595.53 Da PI: 4.2208 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 27 | 1.3e-08 | 12 | 86 | 2 | 80 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeek..ewyfFskrdkkyatgkrknratks 80 ppG+ F+Ptdeel+ g++ + v +++ +++Pw+L +++ +++ fF rd++ ++ +r++r Zmw_sc03242.1.g00050.1.sm.mk 12 PPGLVFDPTDEELI-------GLGEPEAFPGViVEDNTAANTQPWKLLQNHGLSDDdvPAAFFYVRDESRPNARRSRRCDGG 86 8*************.......2344434434526667899*******74333333313558888889999999999997554 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.92E-10 | 10 | 87 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 9.82 | 11 | 88 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 88 aa Download sequence Send to blast |
MSPAKFLGDD HPPGLVFDPT DEELIGLGEP EAFPGVIVED NTAANTQPWK LLQNHGLSDD 60 DVPAAFFYVR DESRPNARRS RRCDGGGT |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A3L6QIZ7 | 2e-16 | A0A3L6QIZ7_PANMI; Uncharacterized protein | ||||
STRING | Pavir.Aa02111.1.p | 1e-15 | (Panicum virgatum) | ||||
STRING | Pavir.Ia01183.1.p | 2e-15 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8717 | 9 | 46 |