PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03238.1.g00080.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 308aa MW: 32808.3 Da PI: 7.9275

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03238.1.g00080.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.6	1.7e-10	148	206	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +++ eLe+kv++L++e ++L +l l+ + l++e+ Zmw_sc03238.1.g00080.1.am.mkhc 148 KRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQRDTSGLTAEN 206 9**********************************************999888888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.7E-15	144	208	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.024	146	209	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	9.8E-11	148	202	No hit	No description
SuperFamily	SSF57959	1.05E-10	148	199	No hit	No description
Pfam	PF00170	3.4E-9	148	205	IPR004827	Basic-leucine zipper domain
CDD	cd14703	5.98E-22	149	198	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence Send to blast
LLLDPDGDFS FSDLDFPSLS DASPAASDPT PPPPPPPSSQ TSQSVPPPQQ KQVSSAAPPR 60 HPGGGGGAHA RSLSFDAAFF DGLSLQQGGG GGGAAGSGGA AGHKRSGSVE GPSSPFEGDS 120 AFSSVVPDYA KKAVPAERLA ELALLDPKRA KRILANRQSA ARSKERKIKY TSELERKVQT 180 LQTEATTLSA QLTLLQRDTS GLTAENRELK LRLQAMEEQA KLRDALNDAL REEVQRLKIA 240 AGQAPNMNGN PFTGGLPQQQ QQMASYFSQP QQMQYFGGQQ VQHHRLNHQQ PQNSSNGGRS 300 LNESMDFM

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001151391.2	1e-138	transcription factor RF2b
TrEMBL	A0A1D6EHU0	1e-137	A0A1D6EHU0_MAIZE; Transcription factor VIP1
TrEMBL	A0A3L6FZV1	1e-137	A0A3L6FZV1_MAIZE; Transcription factor VIP1
STRING	Pavir.Ha01827.1.p	1e-138	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1925	38	92