PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03121.1.g00070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 656aa MW: 70909.2 Da PI: 9.4875 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 93.6 | 3.2e-29 | 205 | 279 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 e+++w+fF++rd+ky+tg r+nrat++gyWk+tgkd+++++ ++++ g+kktLvf++gr p+g++t+W+mhey + Zmw_sc03121.1.g00070.1.sm.mkhc 205 IEDNKWHFFASRDRKYPTGGRSNRATRAGYWKSTGKDRAIKQ-NKRTLGTKKTLVFHEGRPPSGKRTEWIMHEYYI 279 4789*************************************9.999****************************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 33.406 | 143 | 302 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.5E-14 | 204 | 278 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 7.19E-34 | 205 | 301 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 656 aa Download sequence Send to blast |
MTGYGFLGPS CTQRERKKRE VASQVLVPLS PLVFGPTPRG SRTATTSLAP QAKKSSSQLA 60 AGPPDAEHQR IGRSGNPRHP TRRGPHGGQP LGAPRCQKDA RVKQATAPVH KNADGGSSEA 120 PSPQFPFGSA GLASSASRPR LLLLLAQRRE REGVDLTGSL AAGEVGGVGG RRPRARLVAV 180 VVPVSTRRSG LIGRSRRRAK CNLPIEDNKW HFFASRDRKY PTGGRSNRAT RAGYWKSTGK 240 DRAIKQNKRT LGTKKTLVFH EGRPPSGKRT EWIMHEYYID ETECQASPDM KDAFVLCRVT 300 RRDDWDNDNG SGNRNPHPQH PSDAATSVVV SEKQEDPATS VVIAEKLEDT GTSVVIAEKQ 360 NNAATLGICA GEPNHVGTPA IAELSNDVAP TAFMAHSPNS ERELEEWMAE LLTDGPSSPV 420 VDTGSAGLSL NEQDVESSNL QNHGFMGPKV EPGLASPIQN GIDDTQYLTQ ADFENMLSSF 480 DNPIELYSMM ETDNDVFPNI PEGFWNEELP ALQEGLSNEN VDNGIKIRRR SVSASPASSS 540 PSTGRIRLQV GVNRMVTSNS ETTHQTMRFA GKSGHMKSFK RSDDSDATRS SENNSDQGNT 600 DAAKSSEILC NPGKLRGIKG VFRSSSARFN ILFACVCMIG VIAAILHGYG RSGTRL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 6e-24 | 207 | 302 | 70 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-24 | 207 | 302 | 70 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-24 | 207 | 302 | 70 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-24 | 207 | 302 | 70 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-24 | 207 | 302 | 73 | 168 | NAC domain-containing protein 19 |
3swm_B | 5e-24 | 207 | 302 | 73 | 168 | NAC domain-containing protein 19 |
3swm_C | 5e-24 | 207 | 302 | 73 | 168 | NAC domain-containing protein 19 |
3swm_D | 5e-24 | 207 | 302 | 73 | 168 | NAC domain-containing protein 19 |
3swp_A | 5e-24 | 207 | 302 | 73 | 168 | NAC domain-containing protein 19 |
3swp_B | 5e-24 | 207 | 302 | 73 | 168 | NAC domain-containing protein 19 |
3swp_C | 5e-24 | 207 | 302 | 73 | 168 | NAC domain-containing protein 19 |
3swp_D | 5e-24 | 207 | 302 | 73 | 168 | NAC domain-containing protein 19 |
4dul_A | 6e-24 | 207 | 302 | 70 | 165 | NAC domain-containing protein 19 |
4dul_B | 6e-24 | 207 | 302 | 70 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008673881.1 | 1e-131 | NAC domain-containing protein 74 | ||||
TrEMBL | A0A060CZ48 | 1e-130 | A0A060CZ48_MAIZE; NAC domain-containing protein 89 (Fragment) | ||||
STRING | GRMZM2G064541_P01 | 1e-131 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7560 | 38 | 47 |