PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03081.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

TCP

Protein Properties

Length: 566aa MW: 62260.1 Da PI: 10.1535

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03081.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	78.7	1.6e-24	503	549	1	47
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdskt 47 aa +kdrhski+T++g+RdRR+Rls+++a++fF+Lqd+LG+dk+skt Zmw_sc03081.1.g00050.1.am.mk 503 AASRKDRHSKICTAGGMRDRRMRLSLDVARKFFALQDMLGYDKASKT 549 588*******************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	6.4E-24	505	549	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	21.674	506	564	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence Send to blast
MFTEEVAVAG PSSRRANGRR RTTTRKLWVF RCSGSTRPKS KRNQGAEAGR GGKSNDRVPP 60 ASAARTPAAP DDDVLYRGPH SLGVVARFGS FRFMASARRE SSPVRRSPEE NVEKFTRAFP 120 ACESDNGPGS WSAQSVHQPW PIRFSARGVV TSYVQGLFHF AFDRSSKRQR GQRKPYPRRD 180 GQSCDLGGVF ALLELRCALR THHAAMDGWR QAQLDPTTTP RKLRAWEHKH GVAFHGCSFI 240 RATEEAVSAS LWHSETCAPI TALRPEADST LERPPRMRPC MRSEPHIIFF SARTIRCYSD 300 GASCSEPAQL ITNSLGAKPR ELQGLVDFKE AATEMVQQVR PCVLTSPHPH EQQAARYRSP 360 LPVSPLSSSQ DLREGRETHQ GLGVPSPKQM FPFCDSPSPM DMLLYQQLQL SPPSPKPDQY 420 SSFYNYPCSP PFAAAADDDA SSFHLSYQQL GSAAAVTPPP AVIDSPELQI HPSMEQPPAP 480 KHDPSNAQGA GGAVSLDTAS AAAASRKDRH SKICTAGGMR DRRMRLSLDV ARKFFALQDM 540 LGYDKASKTR PRRGKTGTAR YAPPEG

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence Send to blast

MFTEEVAVAG PSSRRANGRR RTTTRKLWVF RCSGSTRPKS KRNQGAEAGR GGKSNDRVPP  60
ASAARTPAAP DDDVLYRGPH SLGVVARFGS FRFMASARRE SSPVRRSPEE NVEKFTRAFP  120
ACESDNGPGS WSAQSVHQPW PIRFSARGVV TSYVQGLFHF AFDRSSKRQR GQRKPYPRRD  180
GQSCDLGGVF ALLELRCALR THHAAMDGWR QAQLDPTTTP RKLRAWEHKH GVAFHGCSFI  240
RATEEAVSAS LWHSETCAPI TALRPEADST LERPPRMRPC MRSEPHIIFF SARTIRCYSD  300
GASCSEPAQL ITNSLGAKPR ELQGLVDFKE AATEMVQQVR PCVLTSPHPH EQQAARYRSP  360
LPVSPLSSSQ DLREGRETHQ GLGVPSPKQM FPFCDSPSPM DMLLYQQLQL SPPSPKPDQY  420
SSFYNYPCSP PFAAAADDDA SSFHLSYQQL GSAAAVTPPP AVIDSPELQI HPSMEQPPAP  480
KHDPSNAQGA GGAVSLDTAS AAAASRKDRH SKICTAGGMR DRRMRLSLDV ARKFFALQDM  540
LGYDKASKTR PRRGKTGTAR YAPPEG

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7253	36	51