PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02997.1.g00130.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 290aa MW: 32047.4 Da PI: 10.8423

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02997.1.g00130.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.1	2.5e-10	190	242	2	54
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +e++r rrk++NR++A+rsR+RK++++eeL+ ++ L ae + +l +l Zmw_sc02997.1.g00130.1.am.mk 190 EERRRKRRKISNRLSAQRSRARKQQRLEELRATAARLRAEKEGFEARLRTLAR 242 7899**************************************99999988865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.1E-9	187	244	No hit	No description
SMART	SM00338	3.4E-8	188	253	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	6.3E-7	190	244	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.657	191	254	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.31E-6	193	248	No hit	No description
PROSITE pattern	PS00036	0	196	211	IPR004827	Basic-leucine zipper domain
CDD	cd14702	4.26E-11	199	243	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence Send to blast
MAGPSRQQAS PTYAPGLPTA PERARRRKER PLFASAAHVR GFLLMPHQPE ESASAVRYER 60 WSPYPPSDRR HHGRKAPHVT VCPGRISGST THELGFDAPV VSTQSQSKTT DEMLSLQEVL 120 GHDTLVAPSC CGGARDHDII TSGFTPWGPE SCPTLDQVLM MAASSATPSL PGQELDGSMD 180 AVITADDDDE ERRRKRRKIS NRLSAQRSRA RKQQRLEELR ATAARLRAEK EGFEARLRTL 240 ARHDVALRCQ NARLRAEAAA LSRRLLALQR LARLQVVAPR PMMGLASLMT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	191	197	RRRKRRK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008665488.1	8e-46	ocs element-binding factor 1-like
TrEMBL	A0A1D6L661	2e-44	A0A1D6L661_MAIZE; Ocs element-binding factor 1
STRING	GRMZM2G177046_P01	3e-45	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13845	24	29