PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02892.1.g00070.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 527aa    MW: 57056.5 Da    PI: 9.7593
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02892.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.8e-17316367156
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                   s+y+GVr+++ +g+W+AeIrdp    +r kr ++g+++t+eeAa+a++a +++++ e
  Zmw_sc02892.1.g00070.1.am.mk 316 SRYRGVRRRP-WGKWAAEIRDP----IRkKRNWIGSYDTEEEAAAAYEALARQYRAE 367
                                   79********.**********7....246***********************99975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.14E-14316349No hitNo description
SuperFamilySSF541715.56E-17316367IPR016177DNA-binding domain
PfamPF008474.1E-11316367IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-20317366IPR001471AP2/ERF domain
PROSITE profilePS5103220.415317376IPR001471AP2/ERF domain
SMARTSM003802.2E-16317382IPR001471AP2/ERF domain
PRINTSPR003671.4E-8318329IPR001471AP2/ERF domain
PRINTSPR003671.4E-8340356IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
LLGACCLLLA ACCSHGRRYR PRKRGGPCVN PGYLGSKKPA HTAVPGARRC SAFSVSAIVA  60
PPALAASSAV FLAIKPLRSS SGAPSLPKKS KSPRTQNTPP LLSSPLAQHS NSIRAWSRSR  120
PFRPPSASVL SSVCSGGGRR GNHARSAGVD CACQPAHDVD LCRRLCCRSM VLSSTSPPAA  180
FSCSLLLQLR QKGARACGFR FRISRFGFGV KYSGFLHLGP LLLIAILESL KNSRIPQITL  240
VRIFCSDPDA TDSSGDEGDR NIQKEKKMMR EVLVPLTNSA AVLVPVKKSK AKKSEMILLP  300
CGTKVLKGPE KKGASSRYRG VRRRPWGKWA AEIRDPIRKK RNWIGSYDTE EEAAAAYEAL  360
ARQYRAEVLA MKGQLPVSQP AALSNSSSVS CVSPAESCKR IAQEAQNSVF VEIDSEPGNE  420
ILLDFSDTPR AKDVSLDVLL GRLDERPVSD SISRPDELRH DGFTNSGDMF PISDFGVTHK  480
PPDNDYIGLA DISHLPLPMD DPEFDLDAAL DWSGFDFTAM GRELGFI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11622RRYRPRK
2321340RRRPWGKWAAEIRDPIRKKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956545.11e-100ethylene-responsive transcription factor ERF021
RefseqXP_004956547.11e-100ethylene-responsive transcription factor ERF021
RefseqXP_022679717.11e-100ethylene-responsive transcription factor ERF021
TrEMBLA0A0A9DCI81e-100A0A0A9DCI8_ARUDO; Uncharacterized protein
STRINGSi030741m2e-99(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763