PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02884.1.g00130.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 462aa MW: 49173.5 Da PI: 6.8621

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02884.1.g00130.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.2	4.2e-14	323	374	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe + L++eN++L+ e e ++k+ + Zmw_sc02884.1.g00130.1.am.mk 323 RRQRRMIKNRESAARSRARKQAYTVELEAELNHLKEENERLRAE-ELMEKMLE 374 79****************************************44.33444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.3E-13	319	381	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.243	321	366	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.2E-13	323	380	No hit	No description
SuperFamily	SSF57959	1.5E-10	323	366	No hit	No description
Pfam	PF00170	3.9E-11	323	374	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.77E-23	323	364	No hit	No description
PROSITE pattern	PS00036	0	326	341	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence Send to blast
MASETSKNVK ALDEQEVTSH QRDQSFRVAS RAAAAAEEPA ADPLARQSSI LSLTLEELQN 60 SLCEPGRNFG SMNMDEFVAN VWNAEEFQAA TGGGKEDHED EATLATGTSE GGGAGGGSGL 120 CRQGSFSLPP PLSRKTVEEV WAEISQGPPG AQPHAAPPQA VVQPQMGSGG VAVSGGQATL 180 GEMTLEDFLV KAGVVRGSLA GHGQAPAAVG MVPTGPLTHM QQGQLAAPMM FQVAPPGNAV 240 YPVMGDGMGY HNGYPGGMTA VPPPPPSQCV VAEVSPGSSD GMSAMTQAEM VNFPGNGGMV 300 MNGGNTRKRE SPEDECTEKT VERRQRRMIK NRESAARSRA RKQAYTVELE AELNHLKEEN 360 ERLRAEELME KMLEQSRENV SAKKQSGRGM RRCGSCMCGL VTLVFLTTDP SSFPRTIPRR 420 RFGDLRLRSA ASKSRVCEAR VTLRFAATRG IGKKVPPLFG IY

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence Send to blast

MASETSKNVK ALDEQEVTSH QRDQSFRVAS RAAAAAEEPA ADPLARQSSI LSLTLEELQN  60
SLCEPGRNFG SMNMDEFVAN VWNAEEFQAA TGGGKEDHED EATLATGTSE GGGAGGGSGL  120
CRQGSFSLPP PLSRKTVEEV WAEISQGPPG AQPHAAPPQA VVQPQMGSGG VAVSGGQATL  180
GEMTLEDFLV KAGVVRGSLA GHGQAPAAVG MVPTGPLTHM QQGQLAAPMM FQVAPPGNAV  240
YPVMGDGMGY HNGYPGGMTA VPPPPPSQCV VAEVSPGSSD GMSAMTQAEM VNFPGNGGMV  300
MNGGNTRKRE SPEDECTEKT VERRQRRMIK NRESAARSRA RKQAYTVELE AELNHLKEEN  360
ERLRAEELME KMLEQSRENV SAKKQSGRGM RRCGSCMCGL VTLVFLTTDP SSFPRTIPRR  420
RFGDLRLRSA ASKSRVCEAR VTLRFAATRG IGKKVPPLFG IY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	105	117	TGTSEGGGAGGGS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that possesses transactivation activity in yeast (PubMed:17604002, PubMed:21055780, PubMed:18236009). Involved in abscisic acid (ABA) signaling pathway. Binds to the G-box motif 5'-CACGTG-3' of TRAB1 gene promoter (PubMed:17604002). Involved in the regulation of pollen maturation. May act as negative regulator of salt stress response (PubMed:18236009). Together with PYL5, PP2C30 and SAPK2, is part of an ABA signaling unit that modulates seed germination and early seedling growth (PubMed:22071266). {ECO:0000269\|PubMed:17604002, ECO:0000269\|PubMed:18236009, ECO:0000269\|PubMed:21055780, ECO:0000269\|PubMed:22071266}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:21055780, PubMed:18236009, PubMed:22071266). Induced by salt stress. Down-regulated by cold and drought stresses (PubMed:18236009). {ECO:0000269\|PubMed:18236009, ECO:0000269\|PubMed:21055780, ECO:0000269\|PubMed:22071266}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001296980.1	0.0	protein ABSCISIC ACID-INSENSITIVE 5
Swissprot	Q8RZ35	1e-155	ABI5_ORYSJ; bZIP transcription factor ABI5 homolog
TrEMBL	K3XIK9	0.0	K3XIK9_SETIT; Uncharacterized protein
STRING	Si001731m	0.0	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3830	35	58

Publications ? help Back to Top
Zou M,Guan Y,Ren H,Zhang F,Chen F A bZIP transcription factor, OsABI5, is involved in rice fertility and stress tolerance. Plant Mol. Biol., 2008. 66(6): p. 675-83 [PMID:18236009] Kim H, et al. A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth. J. Exp. Bot., 2012. 63(2): p. 1013-24 [PMID:22071266] Bhatnagar N, et al. The protein phosphatase 2C clade A protein OsPP2C51 positively regulates seed germination by directly inactivating OsbZIP10. Plant Mol. Biol., 2017. 93(4-5): p. 389-401 [PMID:28000033]