PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02773.1.g00110.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 473aa MW: 51511.8 Da PI: 7.3935

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02773.1.g00110.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.5	5.8e-08	159	184	2	27
XXXCHHHCHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkae 27 +lk rr+++NReAAr+sR+RKk e Zmw_sc02773.1.g00110.1.sm.mkhc 159 TQLKTIRRLAQNREAARKSRLRKKLE 184 5799*******************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.5E-4	155	187	No hit	No description
PROSITE pattern	PS00036	0	165	180	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	6.8E-28	237	310	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence Send to blast
MGETSSSTSH PRQDPCVLGS YGFHGAMGNN SAPPASFFDQ EGTTYFGELE EALMHQVATF 60 GTQHAVDAST AHHGHLHNST SSFHAAATAA AAATVTARPP PTLDIFPSWP MRSLDTPKAG 120 SNVTADSTDS ASSSKNTSNH SSDQHGAAAN MASPQQQQTQ LKTIRRLAQN REAARKSRLR 180 KKLESSKVKL AQMEQDIQRA RAQGLLLGGA PGANTSSGAA MFDLEYARWL EDYGRRMAEL 240 HGALHAHLPD GELRAIVDDT LTHHDELCRL KAQAARSDVF HLITGVWVSP AERCYLWMGG 300 FRPSDLLKTL LPQLDPLTEQ QVVGICNLQQ SSQQAEEALS QGLEQLHQSL ASTMAGGSVT 360 DDPNTSFMSQ MAHALNKLSN LEGFVIQADN LRQQTLHQMH RILTVRQAAR CFLAIGEYHN 420 RLRALSSLWA SRPREILVTD EGNCGELSMV QKTLGPSKAL VKGQMLRLEV TRK

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence Send to blast

MGETSSSTSH PRQDPCVLGS YGFHGAMGNN SAPPASFFDQ EGTTYFGELE EALMHQVATF  60
GTQHAVDAST AHHGHLHNST SSFHAAATAA AAATVTARPP PTLDIFPSWP MRSLDTPKAG  120
SNVTADSTDS ASSSKNTSNH SSDQHGAAAN MASPQQQQTQ LKTIRRLAQN REAARKSRLR  180
KKLESSKVKL AQMEQDIQRA RAQGLLLGGA PGANTSSGAA MFDLEYARWL EDYGRRMAEL  240
HGALHAHLPD GELRAIVDDT LTHHDELCRL KAQAARSDVF HLITGVWVSP AERCYLWMGG  300
FRPSDLLKTL LPQLDPLTEQ QVVGICNLQQ SSQQAEEALS QGLEQLHQSL ASTMAGGSVT  360
DDPNTSFMSQ MAHALNKLSN LEGFVIQADN LRQQTLHQMH RILTVRQAAR CFLAIGEYHN  420
RLRALSSLWA SRPREILVTD EGNCGELSMV QKTLGPSKAL VKGQMLRLEV TRK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00131	DAP	Transfer from AT1G08320	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025828229.1	0.0	transcription factor TGAL4-like isoform X1
Swissprot	Q53Q70	0.0	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	A0A2S3ICM0	0.0	A0A2S3ICM0_9POAL; Uncharacterized protein
STRING	Sb05g003240.1	0.0	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]