PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02759.1.g00200.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 201aa    MW: 21248.1 Da    PI: 12.2231
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02759.1.g00200.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.83.7e-11152197146
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                                   +g W  eEd  l++ v+++G+++W++I ++  + Rt+k+c++rw +
  Zmw_sc02759.1.g00200.1.am.mk 152 KGTWAVEEDAVLLEHVRLHGPRDWSSIRSKGLLPRTGKSCRLRWVN 197
                                   799************************8876677**********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129420.297147201IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.4E-16147201IPR009057Homeodomain-like
SuperFamilySSF466896.47E-13148201IPR009057Homeodomain-like
SMARTSM007175.2E-10151201IPR001005SANT/Myb domain
PfamPF002497.8E-10152197IPR001005SANT/Myb domain
CDDcd001671.92E-11154199No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MPARYLPSKN ISKHDVQGGG PVGERRPRKS EVVGGGGAVA RASSCARSST RPLPAPAAST  60
GESNQSVGCQ PNVLRPATDT TPSLPPLLTV HKGQSQGAAH FQTTSPTRSS RRARALRCAA  120
RGEAMARAPG AARRRAAAGR KASGSSGESV RKGTWAVEED AVLLEHVRLH GPRDWSSIRS  180
KGLLPRTGKS CRLRWVNKLR P
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57003357