PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02753.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 346aa MW: 38111.1 Da PI: 6.9131

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02753.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.5	1.1e-11	85	115	3	33
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 +lk rr+++NReAAr+sR+RKka+i++Le Zmw_sc02753.1.g00030.1.sm.mkhc 85 QLKTIRRLAQNREAARKSRLRKKAYIQQLES 115 6899*************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.7E-7	79	127	No hit	No description
SMART	SM00338	0.0098	83	138	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.646	85	129	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	6.5E-9	85	116	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.45E-6	87	120	No hit	No description
PROSITE pattern	PS00036	0	90	105	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	3.2E-30	167	240	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence Send to blast
MSSSPMISSC SLSYCCCYCN GYSWAAASNT GHLPLLASEV VCPRTQGGST DSESSSKNSS 60 EHSSDQQVAA ATSMASQLDQ VPQLQLKTIR RLAQNREAAR KSRLRKKAYI QQLESSKLKL 120 AKMEQDVQRA RARGLLLGGA PGANTSSGAA LFDMEHARWL EDHARRMAEL HRALHAHLQD 180 GELRALVDDT LTHHDELFRL KAVATKADVF HLITGVWTSP AERCFLWMGG FRPSDLLRTL 240 LPQLDPLTEQ QVIDICNLQQ SSQQAEEALS QGLEQLHQSL ADTMAGGSLI EDANMSFMGQ 300 MALALGKLSN LEGYSPQMKA IMETKALRHN HPHTNMQHSD SEISWS

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence Send to blast

MSSSPMISSC SLSYCCCYCN GYSWAAASNT GHLPLLASEV VCPRTQGGST DSESSSKNSS  60
EHSSDQQVAA ATSMASQLDQ VPQLQLKTIR RLAQNREAAR KSRLRKKAYI QQLESSKLKL  120
AKMEQDVQRA RARGLLLGGA PGANTSSGAA LFDMEHARWL EDHARRMAEL HRALHAHLQD  180
GELRALVDDT LTHHDELFRL KAVATKADVF HLITGVWTSP AERCFLWMGG FRPSDLLRTL  240
LPQLDPLTEQ QVIDICNLQQ SSQQAEEALS QGLEQLHQSL ADTMAGGSLI EDANMSFMGQ  300
MALALGKLSN LEGYSPQMKA IMETKALRHN HPHTNMQHSD SEISWS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004978700.1	1e-148	transcription factor TGAL4
Swissprot	Q53Q70	1e-129	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	A0A368RPK7	1e-154	A0A368RPK7_SETIT; Uncharacterized protein
STRING	Si014861m	1e-150	(Setaria italica)
STRING	Si026421m	1e-150	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]