PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02739.1.g00220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | MYB_related | ||||||||
Protein Properties | Length: 181aa MW: 18911.3 Da PI: 12.3085 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.7 | 1.7e-10 | 138 | 181 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +g W eEd l++ v+++G+++W++I ++ + Rt+k+c++rw Zmw_sc02739.1.g00220.1.sm.mk 138 KGTWAVEEDAVLLEHVRLHGPRDWSSIRSKGLLPRTGKSCRLRW 181 799************************8876677********** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 19.367 | 133 | 181 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.1E-14 | 133 | 181 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 4.52E-11 | 134 | 181 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 5.0E-9 | 138 | 181 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 5.42E-11 | 140 | 181 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MSRGGGPVGE RRPRKSEVVG GGGAVARASS CARSSTRPLP APAASTGESN QSVGCQPNVL 60 RPATDTTPSL PPLLTAQKGQ SQGAAHFQTT SPTRSSRRAR ALRCAARGEA MARAPGAARR 120 RAAAGRKASG SSGESVRKGT WAVEEDAVLL EHVRLHGPRD WSSIRSKGLL PRTGKSCRLR 180 W |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5700 | 33 | 57 |