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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Zmw_sc02694.1.g00050.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family | G2-like | ||||||||
| Protein Properties | Length: 144aa MW: 15056.3 Da PI: 5.6546 | ||||||||
| Description | G2-like family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | G2-like | 40.1 | 8e-13 | 5 | 29 | 27 | 51 |
G2-like 27 AtPktilelmkvkgLtlehvkSHLQ 51
AtPk++lelm+vk+Ltl+hvkSHLQ
Zmw_sc02694.1.g00050.1.am.mk 5 ATPKSVLELMDVKDLTLAHVKSHLQ 29
9************************ PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| TIGRFAMs | TIGR01557 | 1.3E-8 | 4 | 29 | IPR006447 | Myb domain, plants |
| Gene3D | G3DSA:1.10.10.60 | 1.1E-10 | 5 | 29 | IPR009057 | Homeodomain-like |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 144 aa Download sequence Send to blast |
MLAGATPKSV LELMDVKDLT LAHVKSHLQA RPIDGGGSGD EDLQNAEQAQ SAGDINRQPF 60 AAHRSASSEG ATSQAGGGDL ECSSGADDSD GSRARSTSSR MSQNLADQLA CSRYPTKKWE 120 ALAWSSRWGD QTGTGKNMTS SAKN |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_015696540.1 | 3e-22 | PREDICTED: probable transcription factor RL9 | ||||
| TrEMBL | A0A3L6RKZ8 | 2e-20 | A0A3L6RKZ8_PANMI; Putative transcription factor RL9 | ||||
| TrEMBL | J3MX73 | 7e-21 | J3MX73_ORYBR; Uncharacterized protein | ||||
| STRING | Pavir.Fb00812.1.p | 9e-25 | (Panicum virgatum) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP33646 | 3 | 4 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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