PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02694.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 282aa MW: 28969.4 Da PI: 11.6814

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02694.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	39	1.7e-12	248	276	2	30
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPk 30 pr+rWt++LH+rFv+ave LGG+e+ P Zmw_sc02694.1.g00040.1.sm.mk 248 PRMRWTSTLHSRFVHAVELLGGHERESPP 276 9***********************99986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.7E-8	246	275	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence Send to blast
MEAAASAPDL SLHISLPSSN NAASPSSSGL GLGSGGAGGR GPVAGEDPWR RLNGSTASTE 60 LSLSPPPPLR QEGGAGALPW RLRPTAANSP SSSSSASSAG AAFVPVTVPR LSLDAAASAE 120 AARARPINGV PVYSSLAAGS PFLGAGDYRQ RHAKVGLYNP YPSSAWPASL RSTTAAAPAS 180 VDTTATAAFL SPSAYNRMLS GTGRLHLHGA FADTLRGYGG RHQHFGGSLA SSRYMPRLPA 240 SRRGMRAPRM RWTSTLHSRF VHAVELLGGH ERESPPQLGF SL

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that regulates abaxial identity during leaf development. {ECO:0000269\|PubMed:18594992}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025820100.1	3e-97	probable transcription factor RL9 isoform X2
Swissprot	Q0J235	9e-36	ROLL9_ORYSJ; Probable transcription factor RL9
TrEMBL	A0A3L6RKZ8	1e-103	A0A3L6RKZ8_PANMI; Putative transcription factor RL9
STRING	Pavir.Fb00812.1.p	5e-97	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2558	37	87