PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02679.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 545aa MW: 58927.9 Da PI: 11.3145

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02679.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	87.3	2.9e-27	75	220	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk. 79 lppGfrF+Ptdeelvv+yL++k+ g +l++ vi+ v d+y ++Pwd+p a++ e yfF+ r ++ + + ++ +t Zmw_sc02679.1.g00030.1.am.mk 75 LPPGFRFKPTDEELVVQYLRRKAFGAPLPA-AVIPVVrDLYGLDPWDIP---GASDGEKYFFAIRPAASGHVELPRGKTGg 151 79**************************.8899999*******...3467899**9998855444444323 PP NAM 80 .......sgyWkatgkdkevlsk.....kgelvglkktLvfy........kgrapkgektdWvmheyrl 128 sg+Wk gk ++v+ ++ lvg+++ L+f k+ ap g + Wvmheyrl Zmw_sc02679.1.g00030.1.am.mk 152 sggatpaSGRWKPDGKGRPVVLPrpcggGSLLVGVRRALAFAprrgkkntKQAAPAGLMAGWVMHEYRL 220 33333459*********99899877777******9988877767899999*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-36	69	248	IPR003441	NAC domain
PROSITE profile	PS51005	41.31	75	248	IPR003441	NAC domain
Pfam	PF02365	3.7E-17	76	220	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence Send to blast
MAEESRKNTS ELAPDLLDRL AKIMPVKQDA HRQLAALRSL SERKLRAELP SSPADLSVME 60 RVPVLVRHAG GVATLPPGFR FKPTDEELVV QYLRRKAFGA PLPAAVIPVV RDLYGLDPWD 120 IPGASDGEKY FFAIRPAASG HVELPRGKTG GSGGATPASG RWKPDGKGRP VVLPRPCGGG 180 SLLVGVRRAL AFAPRRGKKN TKQAAPAGLM AGWVMHEYRL AAALLHKNGC SSAETAEGEW 240 VVCRVFRKSR QQQQPRRRDQ AVPAGDGTVP RRTQPSLSAA SSASCVTDGS DQDDEFSSVC 300 SAGIYGRQPL APRFPQSRKL HLWSLTRRSR RCAACRTCVW RAARSPRDRD GFVKPPPPPS 360 SPRSIAVVFT RDDGDARIRC KERSIGHSAD LTATWVDGNQ LRGAGGSKAR KETSYQTPIG 420 SDLQQRPISP CVDRSTDGSR SFHSEVFRSP TQALSGHRRV AVRRPRAAGV PVARGENPGR 480 IPVAWTQIAA GCREVWDRRA SSGHASPASA IGYLQINAHD RPGAVSGRGR STLSWSWAVA 540 RGLDG

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence Send to blast

MAEESRKNTS ELAPDLLDRL AKIMPVKQDA HRQLAALRSL SERKLRAELP SSPADLSVME  60
RVPVLVRHAG GVATLPPGFR FKPTDEELVV QYLRRKAFGA PLPAAVIPVV RDLYGLDPWD  120
IPGASDGEKY FFAIRPAASG HVELPRGKTG GSGGATPASG RWKPDGKGRP VVLPRPCGGG  180
SLLVGVRRAL AFAPRRGKKN TKQAAPAGLM AGWVMHEYRL AAALLHKNGC SSAETAEGEW  240
VVCRVFRKSR QQQQPRRRDQ AVPAGDGTVP RRTQPSLSAA SSASCVTDGS DQDDEFSSVC  300
SAGIYGRQPL APRFPQSRKL HLWSLTRRSR RCAACRTCVW RAARSPRDRD GFVKPPPPPS  360
SPRSIAVVFT RDDGDARIRC KERSIGHSAD LTATWVDGNQ LRGAGGSKAR KETSYQTPIG  420
SDLQQRPISP CVDRSTDGSR SFHSEVFRSP TQALSGHRRV AVRRPRAAGV PVARGENPGR  480
IPVAWTQIAA GCREVWDRRA SSGHASPASA IGYLQINAHD RPGAVSGRGR STLSWSWAVA  540
RGLDG

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	6e-23	67	254	7	174	Stress-induced transcription factor NAC1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11818	31	40