PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02654.1.g00130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | FAR1 | ||||||||
Protein Properties | Length: 222aa MW: 25177.6 Da PI: 9.4644 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 36.1 | 2.2e-11 | 47 | 130 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtk 80 +fY++Y + +GF++rk++s++ g +++ Cs +g+++++ + +++r ++++r Cka++ + + + ++ Zmw_sc02654.1.g00130.1.sm.mk 47 NFYKTYLELTGFNIRKNRSRNG---G--HGQDYECSSSGNHSKSPSV--NRKRGKTTNRKRCKAMVCAVTSFdGTTVYFKS 120 6***************987766...3..568*********9998876..889999999*******9866666588999*** PP FAR1 81 leleHnHela 90 ++le nHel+ Zmw_sc02654.1.g00130.1.sm.mk 121 IVLENNHELT 130 ********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 7.1E-8 | 47 | 130 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MTPPVSIPLE NVVTPEEEPV FMHDKRIDPK FILSLDLCFL SMDDSFNFYK TYLELTGFNI 60 RKNRSRNGGH GQDYECSSSG NHSKSPSVNR KRGKTTNRKR CKAMVCAVTS FDGTTVYFKS 120 IVLENNHELT RTPTMTKQMR AHELKEGPID DMIDVLHRAK VKLVNVMNVL RESVGGSENL 180 SMSERDIQNR SRSSLKTGRG GGTVGTRTSQ WLSHCEQQLQ NY |