PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02639.1.g00150.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

TCP

Protein Properties

Length: 827aa MW: 88208 Da PI: 10.9842

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02639.1.g00150.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.4	7.5e-36	359	531	8	135
TCP 8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa...seceaesssssasns 85 ++ h+kv+gR+RRvR+++ caar+F+L++eLG+++d++tieWLl+qa+p+i ++tg+++++a s++ +++ssssa+ + Zmw_sc02639.1.g00150.1.am.mk 359 GKDQHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSILAATGSGTTPAvfvSSSAPSTSSSSAHYQ 439 4899****************************************************88888444222333333333322 PP TCP 86 ssg..........................................kaaksaakskksqksaasalnlakesrakararare 124 +++ + +++a++ + +a++lnl + +a a ra+e Zmw_sc02639.1.g00150.1.am.mk 440 QQQtvlgkrpreesdatvsvaaaasafwaalptsaprsteaswgfSPLEAQATTTYVPMAQAHHLNLIAALSAGAARRAEE 520 222456777888889999999999999999999999999999998666666655555555556899999999***** PP TCP 125 rtrekmriknk 135 +tre m i++ Zmw_sc02639.1.g00150.1.am.mk 521 ETRETMGIRTA 531 ****99975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	4.4E-29	358	445	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	25.747	359	413	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 827 aa Download sequence Send to blast
MSTVAAPSFP LVVSSLHGVS DHKSPTVTLT ANEFRTGSER DMPLLANEAA GTDFCRQGDP 60 IQLYAESELA TQTRTLSKTR KATLVARPFT PPFQHRSSSP ISMADLRFLP NAGVSPSVGR 120 SRHSVVTPPG LPCSRLPAAT QPCVQPCTRP SRPGDGPPRG LGPHPRRPPL TPKSGGASCT 180 APRVDVHSSG MQLGGMPSPA TTCPSSAPHH PVSVARELFH RFRPVLHAKS LIIRCPCDAQ 240 HDRGELAGKT GGSLRSGQVA VPAQSICFTA GRALSRLRST GPHLHLSPLQ SSPSPATRQR 300 QPTGAMATRD VSTAAAAAAM FHVYQPLQVP STAVTAAATD GALVVPATTP GKKKASQGGK 360 DQHSKVNGRG RRVRMPIVCA ARVFQLTREL GLKSDGQTIE WLLRQAEPSI LAATGSGTTP 420 AVFVSSSAPS TSSSSAHYQQ QQTVLGKRPR EESDATVSVA AAASAFWAAL PTSAPRSTEA 480 SWGFSPLEAQ ATTTYVPMAQ AHHLNLIAAL SAGAARRAEE ETRETMGIRT AGEQITAMID 540 TGESQSNSIS PRRSLFLHDT SLSLCSEGKG KCGKRLRRLH PHSSLAAARP PASENFASAN 600 EERSRPLRLR LRTRTVRFVR VKAQVLRTLH QGRWHVSLCR TFSCYLDHVL LPLTEDEDLV 660 CGAALSCSPC RAPARLLTTK PAYVHRPAGA RARASMDTTT PSDEAESFGA RDRDETGRSP 720 PVLGAGSSEH GTARCPVRFA LPGWRPVPYL CRASSCLPAS SDFVREPRLD PATTSRRKNT 780 LPSRHGTARR GAVLGASLEC RAEQVAVADS QLHRRPRAAV DNRRCVY

Sequence ? help Back to Top

Protein Sequence Length: 827 aa Download sequence Send to blast

MSTVAAPSFP LVVSSLHGVS DHKSPTVTLT ANEFRTGSER DMPLLANEAA GTDFCRQGDP  60
IQLYAESELA TQTRTLSKTR KATLVARPFT PPFQHRSSSP ISMADLRFLP NAGVSPSVGR  120
SRHSVVTPPG LPCSRLPAAT QPCVQPCTRP SRPGDGPPRG LGPHPRRPPL TPKSGGASCT  180
APRVDVHSSG MQLGGMPSPA TTCPSSAPHH PVSVARELFH RFRPVLHAKS LIIRCPCDAQ  240
HDRGELAGKT GGSLRSGQVA VPAQSICFTA GRALSRLRST GPHLHLSPLQ SSPSPATRQR  300
QPTGAMATRD VSTAAAAAAM FHVYQPLQVP STAVTAAATD GALVVPATTP GKKKASQGGK  360
DQHSKVNGRG RRVRMPIVCA ARVFQLTREL GLKSDGQTIE WLLRQAEPSI LAATGSGTTP  420
AVFVSSSAPS TSSSSAHYQQ QQTVLGKRPR EESDATVSVA AAASAFWAAL PTSAPRSTEA  480
SWGFSPLEAQ ATTTYVPMAQ AHHLNLIAAL SAGAARRAEE ETRETMGIRT AGEQITAMID  540
TGESQSNSIS PRRSLFLHDT SLSLCSEGKG KCGKRLRRLH PHSSLAAARP PASENFASAN  600
EERSRPLRLR LRTRTVRFVR VKAQVLRTLH QGRWHVSLCR TFSCYLDHVL LPLTEDEDLV  660
CGAALSCSPC RAPARLLTTK PAYVHRPAGA RARASMDTTT PSDEAESFGA RDRDETGRSP  720
PVLGAGSSEH GTARCPVRFA LPGWRPVPYL CRASSCLPAS SDFVREPRLD PATTSRRKNT  780
LPSRHGTARR GAVLGASLEC RAEQVAVADS QLHRRPRAAV DNRRCVY

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1941	33	100