PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02565.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 460aa MW: 49080.4 Da PI: 7.1314

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02565.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.2	4.2e-14	321	372	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe + L++eN++L+ e e ++k+ + Zmw_sc02565.1.g00030.1.am.mk 321 RRQRRMIKNRESAARSRARKQAYTVELEAELNHLKEENERLRAE-ELMEKMLE 372 79****************************************44.33444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.3E-13	317	379	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.243	319	364	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.5E-10	321	364	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.2E-13	321	378	No hit	No description
Pfam	PF00170	3.9E-11	321	372	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.31E-23	321	362	No hit	No description
PROSITE pattern	PS00036	0	324	339	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009737	Biological Process	response to abscisic acid
GO:0009739	Biological Process	response to gibberellin
GO:0010187	Biological Process	negative regulation of seed germination
GO:0010200	Biological Process	response to chitin
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048316	Biological Process	seed development
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence Send to blast
MASETSKNVK ALDEQEVTSH QRDQSFRVAS RAAAAEEPAA DPLARQSSIL SLTLEELQNS 60 LCEPGRNFGS MNMDEFMANI WNAEEFQAAT GGGKEDHEDE ATLATGTGEG GGAGGGSGLC 120 RQGSFSLAPP LSRKTVEEVW AEISQGPPGA QPHAAPQAVV QPQMGSGGVA ASGRQATLGE 180 MTLEDFLVKA GVVRGSLAGH GQAPAAVGMV PTGPLTHMQQ GQLAAPMMFQ VAPPGNAVYP 240 VMGDGMGYHN GYPGGMTVVP PPPPSQCVVA EVSPGSSDGM SAMTQAEMVN FPGNGGMVMN 300 GGNTRKRESP EDECTEKTVE RRQRRMIKNR ESAARSRARK QAYTVELEAE LNHLKEENER 360 LRAEELMEKM LEQSRENVSA KKQSGRGMRR CGSCMCGLVT LVFLTTDPSS FPRTIPRRRF 420 GDLRLRSAAS KSRVCEARVT LRFAATRGIG KKVPPVFGIY

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence Send to blast

MASETSKNVK ALDEQEVTSH QRDQSFRVAS RAAAAEEPAA DPLARQSSIL SLTLEELQNS  60
LCEPGRNFGS MNMDEFMANI WNAEEFQAAT GGGKEDHEDE ATLATGTGEG GGAGGGSGLC  120
RQGSFSLAPP LSRKTVEEVW AEISQGPPGA QPHAAPQAVV QPQMGSGGVA ASGRQATLGE  180
MTLEDFLVKA GVVRGSLAGH GQAPAAVGMV PTGPLTHMQQ GQLAAPMMFQ VAPPGNAVYP  240
VMGDGMGYHN GYPGGMTVVP PPPPSQCVVA EVSPGSSDGM SAMTQAEMVN FPGNGGMVMN  300
GGNTRKRESP EDECTEKTVE RRQRRMIKNR ESAARSRARK QAYTVELEAE LNHLKEENER  360
LRAEELMEKM LEQSRENVSA KKQSGRGMRR CGSCMCGLVT LVFLTTDPSS FPRTIPRRRF  420
GDLRLRSAAS KSRVCEARVT LRFAATRGIG KKVPPVFGIY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	106	116	TGEGGGAGGGS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that possesses transactivation activity in yeast (PubMed:17604002, PubMed:21055780, PubMed:18236009). Involved in abscisic acid (ABA) signaling pathway. Binds to the G-box motif 5'-CACGTG-3' of TRAB1 gene promoter (PubMed:17604002). Involved in the regulation of pollen maturation. May act as negative regulator of salt stress response (PubMed:18236009). Together with PYL5, PP2C30 and SAPK2, is part of an ABA signaling unit that modulates seed germination and early seedling growth (PubMed:22071266). {ECO:0000269\|PubMed:17604002, ECO:0000269\|PubMed:18236009, ECO:0000269\|PubMed:21055780, ECO:0000269\|PubMed:22071266}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00294	DAP	Transfer from AT2G36270	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:21055780, PubMed:18236009, PubMed:22071266). Induced by salt stress. Down-regulated by cold and drought stresses (PubMed:18236009). {ECO:0000269\|PubMed:18236009, ECO:0000269\|PubMed:21055780, ECO:0000269\|PubMed:22071266}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001296980.1	0.0	protein ABSCISIC ACID-INSENSITIVE 5
Swissprot	Q8RZ35	1e-156	ABI5_ORYSJ; bZIP transcription factor ABI5 homolog
TrEMBL	K3XIK9	0.0	K3XIK9_SETIT; Uncharacterized protein
STRING	Si001731m	0.0	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3830	35	58

Publications ? help Back to Top
Zou M,Guan Y,Ren H,Zhang F,Chen F A bZIP transcription factor, OsABI5, is involved in rice fertility and stress tolerance. Plant Mol. Biol., 2008. 66(6): p. 675-83 [PMID:18236009] Kim H, et al. A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth. J. Exp. Bot., 2012. 63(2): p. 1013-24 [PMID:22071266] Bhatnagar N, et al. The protein phosphatase 2C clade A protein OsPP2C51 positively regulates seed germination by directly inactivating OsbZIP10. Plant Mol. Biol., 2017. 93(4-5): p. 389-401 [PMID:28000033]