PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02489.1.g00060.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 264aa MW: 28799.5 Da PI: 5.0511

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02489.1.g00060.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	39.3	1.5e-12	45	70	1	26
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 ++rlrWt+eLHerFveav+qLGG++ Zmw_sc02489.1.g00060.1.sm.mkhc 45 RQRLRWTNELHERFVEAVTQLGGPDS 70 58*********************984 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	6.9E-11	44	72	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.0E-8	46	70	IPR006447	Myb domain, plants
Pfam	PF14379	6.0E-23	92	137	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence Send to blast
MHSTKPEASF EQVHTAADVN QQQMVFAGNM GASNGANNNA NMAARQRLRW TNELHERFVE 60 AVTQLGGPDS NKADNKDPGD LLAGLEGSAG LQISEALKLQ MEVQKRLHEQ LEVQKQLQLR 120 IEAQGKYLQK IIEEQQRLTG VKPEVPGASI TVSSNEQVPD SERTEPSTPA PTSESPTQGA 180 SNRDNGGQTE ALKSPCHDDS LCQHEPLTPD SNRQPGSPTA SPNHERAAKR QRGSGTEFSE 240 GDFPLTRHIF ESSSGSEFQQ YSMS

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00252	DAP	Transfer from AT2G01060	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001152613.1	1e-136	MYB-CC type transfactor
Refseq	XP_023156307.1	1e-136	MYB-CC type transfactor isoform X1
Swissprot	Q9SJW0	3e-62	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A3L6DZW5	1e-134	A0A3L6DZW5_MAIZE; Myb family transcription factor PHL7
TrEMBL	B4F7W7	1e-134	B4F7W7_MAIZE; MYB-CC type transfactor
TrEMBL	K4JRK4	1e-134	K4JRK4_MAIZE; G2-like transcription factor (Fragment)
STRING	GRMZM2G173943_P02	1e-135	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2220	38	96