PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc02489.1.g00050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 217aa MW: 23615.8 Da PI: 8.4918 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 38.1 | 3.3e-12 | 32 | 55 | 2 | 25 |
G2-like 2 prlrWtpeLHerFveaveqLGGse 25 prlrWt +LHerFv+av+qLGG+e Zmw_sc02489.1.g00050.1.sm.mk 32 PRLRWTADLHERFVDAVAQLGGPE 55 8*********************97 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 5.3E-10 | 32 | 67 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 3.6E-20 | 93 | 138 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 217 aa Download sequence Send to blast |
MFPPGLIHHR PDGPAPSDAP PRAGPGGGPS LPRLRWTADL HERFVDAVAQ LGGPEIYPVE 60 LLSCGLKALK YRLGKQSGKE GSEQSKDGKL SQEVKEALRA QMEVQRRLHE QVEVQKRVQI 120 RMDALQKYID AILENACKLV TEQFASSGFS ISDPDLPDLS SGGVICGPND TLRSSVFNQV 180 SVSSIDSHSR GDKPSRSGVE GPPLHLQKPP ELKRRSS |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_004956514.1 | 1e-108 | protein PHR1-LIKE 2 isoform X1 | ||||
Swissprot | Q94A57 | 1e-34 | PHL2_ARATH; Protein PHR1-LIKE 2 | ||||
TrEMBL | A0A368Q049 | 1e-107 | A0A368Q049_SETIT; Uncharacterized protein | ||||
TrEMBL | K3ZV10 | 1e-107 | K3ZV10_SETIT; Uncharacterized protein | ||||
STRING | Si030441m | 1e-107 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3427 | 38 | 73 |
Publications ? help Back to Top | |||
---|---|---|---|
|