PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02451.1.g00150.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 472aa MW: 48472.3 Da PI: 7.8634

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02451.1.g00150.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	104	8.7e-33	217	264	3	50
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvP 50 +al+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvP Zmw_sc02451.1.g00150.1.am.mk 217 AEALRCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVP 264 57899******************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	9.0E-25	214	264	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.2E-29	219	265	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	25.136	220	274	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	222	258	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence Send to blast
MCVDEAIRAK RETNIVPVLA YRRYSAATAD ASGGADVGLL SSSTTSTRLV RQQDDRPRAR 60 TGQRWFGSLV PIAASYSGSS SAGRPDCCCP SATELVDTKL PVRPVRHCTV SSAQDDAVPG 120 HQAASELMAK RRDRVPSFFL IASSSAAAIK LALGSEPTPL KTPPTPPSLS LSSPPILTTS 180 PLSSSSTRPS LEMAGAGAAT AVQQPSAGAP GGADPRAEAL RCPRCDSANT KFCYYNNYSL 240 SQPRHFCKAC KRYWTRGGTL RNVPSLTSAL GLSGGASLAS LLLSNGGGGS GADHLGLFHA 300 AMQSVVSDTS AYEMQQQTQV DHLLGLGYGG GGAGAQIQLK PWLQDAGAGA GGIMDTFYAP 360 LLSRSIVPGL EELHVKAEAA GAGEPQQAKA AAAWEQNSWE LSTPSSTSNI VASDGLMAAA 420 ASTMNNPAVS STASTATAAP SSFMYWANDG IGGAAASWPD LANCGSSIAT LF

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence Send to blast

MCVDEAIRAK RETNIVPVLA YRRYSAATAD ASGGADVGLL SSSTTSTRLV RQQDDRPRAR  60
TGQRWFGSLV PIAASYSGSS SAGRPDCCCP SATELVDTKL PVRPVRHCTV SSAQDDAVPG  120
HQAASELMAK RRDRVPSFFL IASSSAAAIK LALGSEPTPL KTPPTPPSLS LSSPPILTTS  180
PLSSSSTRPS LEMAGAGAAT AVQQPSAGAP GGADPRAEAL RCPRCDSANT KFCYYNNYSL  240
SQPRHFCKAC KRYWTRGGTL RNVPSLTSAL GLSGGASLAS LLLSNGGGGS GADHLGLFHA  300
AMQSVVSDTS AYEMQQQTQV DHLLGLGYGG GGAGAQIQLK PWLQDAGAGA GGIMDTFYAP  360
LLSRSIVPGL EELHVKAEAA GAGEPQQAKA AAAWEQNSWE LSTPSSTSNI VASDGLMAAA  420
ASTMNNPAVS STASTATAAP SSFMYWANDG IGGAAASWPD LANCGSSIAT LF

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025803596.1	7e-98	dof zinc finger protein 2-like
TrEMBL	A0A3L6T9P7	1e-101	A0A3L6T9P7_PANMI; Dof zinc finger protein DOF5.1-like
STRING	Sb02g034320.1	7e-97	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8895	30	41