PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02446.1.g00080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 571aa MW: 62011.9 Da PI: 10.4307 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 65.1 | 1.1e-20 | 391 | 452 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 +Dg++WrKYG K++++++fpr YYrCt++ +Cp++k+v+++ ++d+ + +tY +eH ++ Zmw_sc02446.1.g00080.1.am.mk 391 NDGHQWRKYGEKKINNTNFPRYYYRCTYKdnmNCPATKQVQQKdSSDTPLYAVTYYNEHSCN 452 8***************************99999*******875167999**********997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.3E-22 | 378 | 452 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-21 | 385 | 452 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 16.627 | 385 | 454 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.7E-31 | 390 | 453 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.5E-24 | 391 | 451 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 571 aa Download sequence Send to blast |
MGTSFSALRH VTAGDRRPSQ PRACLSLGPQ RPRYRADAAA ATFEAPQAVL RPSLGRRCRA 60 LAAPPLASNA GGREKPGPNS RSAAASARLP SAGPRANKYQ DPAGFHHYQL ANHVVYSDRA 120 SRPASEVSLA SNPNFAVGVF LAAGGSSQKS APSSSSSRRF FKILLTSPRE MRCPPMAPEL 180 RVSTTTKWGP AVEPPRQGRF LPAAPCCMPL DSREASTDHG AGKENEASGE INDRLLRAVN 240 KYSTGDTAPE TTPDPFFLWS LGPQKKKKRA PKKARPKSSV RGGHVTAMRR PGDWSDGREA 300 VRSISPRDLA PAGRLVLSVS SSLSPSPSAF LDFFIRPEGT NNVSGAELAP ATHESEVLLP 360 TCRWLQRSSA RCVLPRKEKR MKQVDSFAPH NDGHQWRKYG EKKINNTNFP RYYYRCTYKD 420 NMNCPATKQV QQKDSSDTPL YAVTYYNEHS CNSAYLSLFP SEFQLQTSSG KAISICFDSS 480 AAPQEPVASA CSPSSSAAXX XXPAAMRRGT PPETKRPPAP VLRRSETYPW GAGAVEQRPP 540 ASCGTERLGA AVPVEVVDAG RFGEIRFFHF L |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 2e-13 | 391 | 451 | 9 | 68 | OsWRKY45 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 265 | 276 | KKKRAPKKARPK |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2032 | 35 | 100 |