PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02435.1.g00170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 322aa MW: 36665.8 Da PI: 7.1487 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.7 | 2.5e-13 | 32 | 63 | 2 | 33 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLee 33 +++k+ rr+++NReAAr+sR+RKka+i++Le+ Zmw_sc02435.1.g00170.1.sm.mkhc 32 PPDKVLRRLAQNREAARKSRLRKKAYIQQLET 63 5799**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-7 | 27 | 72 | No hit | No description |
SMART | SM00338 | 8.1E-7 | 31 | 95 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.0E-10 | 33 | 64 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.27E-7 | 35 | 68 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 38 | 53 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.4E-28 | 121 | 195 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence Send to blast |
MEADNKFDAR LEDVPHVALE PARSTDQETS KPPDKVLRRL AQNREAARKS RLRKKAYIQQ 60 LETSRIKLAQ LEQDIVRARQ QGVYANGNMG DSTLGFTGSL DPGVASFEID YNHWVDEQNR 120 HTRELRNALQ GQTSDLELRM LVETGLSNYE HLFDIKSIAA QSDVFYIMSG MWKTSVERFF 180 LWIGGFRPSE VLKILGPRLE PLTDAQRMAV CRLQQTSTQA EDALFQGMEK LQQNVMETLT 240 VVDPIAPAEA YMLQMTNAVD KLKELVGFVI QADHLRLTTL QQMHKILTTQ QAARGLLALG 300 DYFQRLRTLS QLWACDALNR RG |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025823704.1 | 0.0 | transcription factor TGAL6-like isoform X2 | ||||
Refseq | XP_025823705.1 | 0.0 | transcription factor TGAL6-like isoform X2 | ||||
Swissprot | A0A0P0WFC8 | 1e-160 | TGAL6_ORYSJ; Transcription factor TGAL6 | ||||
TrEMBL | A0A0A9D9I6 | 0.0 | A0A0A9D9I6_ARUDO; Uncharacterized protein | ||||
STRING | Pavir.Ga00349.1.p | 0.0 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3571 | 38 | 77 |