PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02435.1.g00080.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 184aa    MW: 20411 Da    PI: 9.5705
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02435.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.43.8e-061091511454
                                   HHHHHHHHHHHCTSCCC.....TTS-STCHHHHHHHHHHHHHH CS
                           HLH  14 driNsafeeLrellPkas..kapskKlsKaeiLekAveYIksL 54 
                                   d+i + +++L+ llP+++  ++++ + s a +L+ ++ YI+sL
  Zmw_sc02435.1.g00080.1.am.mk 109 DQISELLSKLQALLPESTqaRNGAHRGSAARVLQDTCSYIRSL 151
                                   6899************7756777778***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.4795151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-7109168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-8109155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0009826Biological Processunidimensional cell growth
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MAVGVFPYGD EFLPSKDPAL FRDATRWGTQ QGDEKVYVER VRDTSMVDRS ACPATTRPPY  60
LCTRVFLRYN SRSRSVSFLL RMSSGRRTRP RRAGSTLSSS SSRSTISEDQ ISELLSKLQA  120
LLPESTQARN GAHRGSAARV LQDTCSYIRS LHQEVDSLSE TLAELLSSAD VTSDQAAVIR  180
SLLM
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP122932837