PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02405.1.g00040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | FAR1 | ||||||||
Protein Properties | Length: 68aa MW: 7701.59 Da PI: 10.5159 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 33.5 | 1.4e-10 | 6 | 63 | 1 | 65 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkak 65 +fY++Y++ +GF+++k++s++ g +++ Cs +g+++++ + +++r ++++r gCka+ Zmw_sc02405.1.g00040.1.sm.mk 6 NFYKTYSELAGFNIKKNRSRNG---G--RGQDYECSSSGNNRKSPSV--NHKRGKTTKRKGCKAM 63 6**************9987766...3..567**********998876..999999*********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 3.0E-7 | 6 | 63 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 68 aa Download sequence Send to blast |
MDDVFNFYKT YSELAGFNIK KNRSRNGGRG QDYECSSSGN NRKSPSVNHK RGKTTKRKGC 60 KAMGISEY |