PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02368.1.g00080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | GATA | ||||||||
Protein Properties | Length: 74aa MW: 7983.3 Da PI: 11.9344 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 25.9 | 1.4e-08 | 26 | 45 | 1 | 20 |
GATA 1 CsnCgttkTplWRrgpdgnk 20 C+ C++t Tp+WR gp g++ Zmw_sc02368.1.g00080.1.sm.mk 26 CVECRATATPMWRGGPTGPR 45 ******************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.50.10 | 4.7E-6 | 25 | 43 | IPR013088 | Zinc finger, NHR/GATA-type |
PROSITE profile | PS50114 | 9.658 | 26 | 74 | IPR000679 | Zinc finger, GATA-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 74 aa Download sequence Send to blast |
MDSLQHKAIG IGVAAAAAPE ERRPFCVECR ATATPMWRGG PTGPRVSKRS VFRFSPHPVD 60 RLILRSVSAA VVGR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1E5W092 | 3e-11 | A0A1E5W092_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J31164.1.p | 6e-12 | (Panicum virgatum) |