PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02285.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 347aa MW: 37833.2 Da PI: 10.4165

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02285.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.8	2e-07	254	296	15	57
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++A rs +RK +i+eLe+kv+ L++e ++L +l l+ +a Zmw_sc02285.1.g00050.1.am.mk 254 ISAARSKERKMRYIAELEQKVQILQTEATTLSAQLTLLQRDSA 296 69********************************999987766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.9E-5	248	304	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.1E-6	254	296	No hit	No description
CDD	cd14703	2.47E-16	254	296	No hit	No description
SuperFamily	SSF57959	1.61E-6	254	294	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence Send to blast
MPRHRPPRDA FPAWSCRDPG EHTKGPRKET RRKRDAEASD AVSAAEVSRG WLATPPQGPP 60 PLPHEGGTTK RRLNTHKSAR PAKHRSIRSH RRAPLPPHAA RKAAAHRRSR SDVPLGYFPP 120 PKVEAGLGGH HDADDLFTAF LNLEGLDGLH NSSDERHDDG DRDSRGSSMK MTNGADSSEN 180 ESEEGAAADR RPAGVRLWAT DAINRLEGLN LKRSAAGEPS AAPMVRHARS LSVDSLIGKF 240 NFSAGGTTSA TSGISAARSK ERKMRYIAEL EQKVQILQTE ATTLSAQLTL LQRDSAGIAT 300 QNNELKFRLQ AMEQQAQLRD GNIPRAEVVD ADMLACPSSW VHVHLTS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence Send to blast

MPRHRPPRDA FPAWSCRDPG EHTKGPRKET RRKRDAEASD AVSAAEVSRG WLATPPQGPP  60
PLPHEGGTTK RRLNTHKSAR PAKHRSIRSH RRAPLPPHAA RKAAAHRRSR SDVPLGYFPP  120
PKVEAGLGGH HDADDLFTAF LNLEGLDGLH NSSDERHDDG DRDSRGSSMK MTNGADSSEN  180
ESEEGAAADR RPAGVRLWAT DAINRLEGLN LKRSAAGEPS AAPMVRHARS LSVDSLIGKF  240
NFSAGGTTSA TSGISAARSK ERKMRYIAEL EQKVQILQTE ATTLSAQLTL LQRDSAGIAT  300
QNNELKFRLQ AMEQQAQLRD GNIPRAEVVD ADMLACPSSW VHVHLTS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025796879.1	2e-94	transcription factor RF2b-like
TrEMBL	A0A2S3IUN2	5e-93	A0A2S3IUN2_9POAL; Uncharacterized protein
STRING	Pavir.J29906.1.p	3e-92	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3536	35	76