PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02252.1.g00020.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family HB-other
Protein Properties Length: 923aa    MW: 101348 Da    PI: 10.2499
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02252.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox33.29.1e-11739787351
                                   --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHH CS
                      Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNr 51 
                                   +R +++++q++ Lee F++n++p++ +++ LA+ +++t +qV +W +  
  Zmw_sc02252.1.g00020.1.am.mk 739 RRKRLSHYQTRMLEESFQQNNNPDKVTKQALADTVNVTLKQVHTWLKKD 787
                                   6899*****************************************6655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF561121.24E-18434526IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.205.4E-24436514No hitNo description
PfamPF000692.6E-12439527IPR000719Protein kinase domain
PROSITE profilePS500119.503439784IPR000719Protein kinase domain
SMARTSM002204.1E-5439576IPR000719Protein kinase domain
PROSITE patternPS001070445469IPR017441Protein kinase, ATP binding site
Gene3DG3DSA:1.10.510.103.0E-5515573No hitNo description
PROSITE profilePS5007110.981734794IPR001356Homeobox domain
SMARTSM003891.8E-5737798IPR001356Homeobox domain
SuperFamilySSF466891.5E-10738790IPR009057Homeodomain-like
CDDcd000862.90E-8739785No hitNo description
PfamPF000462.9E-8739788IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.8E-9739788IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 923 aa     Download sequence    Send to blast
MVWLWRLLTH SRESPRGLWP AEFDQFKADG AAPAPPTGAL APARRNSRSR SRSPGMASLA  60
PQRRHSVQTY WARRTYRRLG SPSRRLRVAR LGGRKQQPGS IRAGSIPSAA LPVPLLLRPL  120
VQEGHLVIRA APCEELHVCE GGIVGSSPCD GDRTGGRAGA CFVVLGLVAE LSLSSWFGDG  180
PSESPAFAAA GHDSDSCFVG QVFQTNSLHA LVLHGDVHRT TIPRGRAPPE EEMRSEERNQ  240
PPATSPHASP NPRAPASAFL LSPPQAKRRA PRRSRAPNAR GARFMGGRAR SLLRWLRHRS  300
RRVSSSSSSS SSSFPLTTND TTTTSGDLHA QSLPHLDRGE EADESEEEEE EEVAEPESSE  360
GCIVVEACGA AGTRAPVPAR TQPPRMDSSK KVRAFFPLRR LCFCSSAVTF GSMTITMCGR  420
RVPMAESDFF TEYGEANRYQ VSEVIGKGSY GVVAAAIDTQ TGERVAIKKI IDVFDHVSDA  480
TRILREVKLL RLLRHPDIVQ IKHIMLPPSR REFKDIYIRN EKARRYLSNM RKKAPVPFTK  540
KFPDVEPMAL HLLKRLLSFD PKERPSAEEN HAHANHAARS PRCHHRAALP PARAARSDKA  600
AHASVTDGIS QPQLSARSLL KSESISASKC IGQEPRKATS AYWSFRRLAN TSPGPFACHR  660
WSPQELPSPS PSALELTIAT PAYGHKGSNI ENNRELALLD AFDHPLSGGG EDAEAHAGME  720
KEGNEDTQLV GVGPAFQPRR KRLSHYQTRM LEESFQQNNN PDKVTKQALA DTVNVTLKQV  780
HTWLKKDKME QDETELNGYK SQVESLTEET HYLRCKLKKL KKKYNKLKLK QAPPPMALPL  840
PPPPPPQAIA AGAAAVEQQQ HQNQVMYVPV LTGLFANREQ SVATTTVTTA PFNAQQGRAT  900
AIPGLPIAAN TLQLPPPSDY SNN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5ci6_A8e-1744552144120Mitogen-activated protein kinase 6
5ci6_B8e-1744552144120Mitogen-activated protein kinase 6
6dtl_A8e-1744552138114Mitogen-activated protein kinase 6
6dtl_B8e-1744552138114Mitogen-activated protein kinase 6
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3650523