PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02246.1.g00090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 331aa MW: 36735.3 Da PI: 9.3488 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.4 | 2e-10 | 47 | 87 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L Zmw_sc02246.1.g00090.1.sm.mkhc 47 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 87 788*************************9877777766555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-8 | 37 | 90 | No hit | No description |
SMART | SM00338 | 1.7E-7 | 43 | 106 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.438 | 45 | 89 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.6E-7 | 47 | 87 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.94E-7 | 47 | 90 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 50 | 65 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 6.9E-34 | 129 | 204 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence Send to blast |
MMADASPRTD TSTDDTDENH LIVVGQGALG AASDSSDRSK DKHGDQKTLR RLAQNREAAR 60 KSRLRKKAYV QQLENSRLKL TQLEQELQRA RQQGIFISSS VDQSQSKSGN GALAFDMEYA 120 RWLEEHNRQI SELRAGVSAH ASDTDLRSVV DKIMSHYDEI FRLKGNAAKA DVFHVLSGMW 180 KTPAERCFLW LGGFRPSEVL KLLSTQLEPL TDQQLSGISS LQQSSQQAED ALSQGMEALQ 240 QSLAETLAGS LSSSGSTGNV ANYMGQMAMA MGKLGTLENF LRQADNLRLQ TLQQLQRILT 300 TRQSARAFLV ISDYSSRLRA LSSLWLARPK E |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002457410.1 | 0.0 | transcription factor TGA2.3 isoform X1 | ||||
Refseq | XP_021312815.1 | 0.0 | transcription factor TGA2.3 isoform X1 | ||||
Refseq | XP_021312816.1 | 0.0 | transcription factor TGA2.3 isoform X1 | ||||
Swissprot | P23923 | 0.0 | HBP1B_WHEAT; Transcription factor HBP-1b(c38) | ||||
TrEMBL | C5XQR1 | 0.0 | C5XQR1_SORBI; Uncharacterized protein | ||||
STRING | Sb03g006790.1 | 0.0 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP486 | 38 | 185 |
Publications ? help Back to Top | |||
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