PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc02231.1.g00240.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 216aa MW: 23231 Da PI: 4.5152 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.9 | 3.2e-11 | 59 | 106 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r r+++NR +A rsR+R+ a++ eLe++ L +eN++Lk l +e+ Zmw_sc02231.1.g00240.1.am.mk 59 RRRERRMRNRASAERSRARRYAYVNELENELCLLRQENERLK----GLCQEI 106 78889*********************************8666....444444 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0018 | 55 | 116 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.519 | 57 | 100 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.5E-8 | 59 | 106 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.31E-9 | 59 | 105 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.8E-10 | 59 | 105 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 63 | 77 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 216 aa Download sequence Send to blast |
MNTEPRRGEP QGQRTAPGAC LCPVAAAAAL TPPPDSSELE QALLSRADLL QLHQGGVDRR 60 RERRMRNRAS AERSRARRYA YVNELENELC LLRQENERLK GLCQEIDSLR ISGFRRSSSF 120 VCILAVGGGS EGPGAAGNED EDEDKDDHSA AAAEDLLVAV LAKLFLVEHL GSWSIGSYLP 180 CVPGDDEQEE DGGTVACSCG ELASVLIAVL VEKLAS |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP35470 | 3 | 4 |