PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02227.1.g00110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 270aa MW: 29694.1 Da PI: 5.6878 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 29.6 | 1.5e-09 | 234 | 258 | 2 | 26 |
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26 r++W+peLH+ F++a++qLGG++ Zmw_sc02227.1.g00110.1.sm.mk 234 LRRCWSPELHRLFLQALQQLGGAQG 258 69********************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.2E-6 | 231 | 257 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence Send to blast |
MGMDPPPPQP PSLHADAAGD RRRCREYLLA LEEERRKIQV FQRELPLCLD LVTQTIERIK 60 LEMDGVGSEE TVSDRGPVLE EFMPLKPSLS LSSSEEHDSA RDTSGGVGKE AEAADTPPEM 120 KKATPDWLQS VRLWSQEPQH QRTTSSSHKE LPCKPVALNA RKAGGAFQPF EKEKRVEMPA 180 SSTTAAASST VAGDSGDKAV ASMDTEKHSS DDKETTNKDG TGKDKEGQSP SRKLRRCWSP 240 ELHRLFLQAL QQLGGAQGWY PSHPAPDRAD |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional repressor that may play a role in response to nitrogen. May be involved in a time-dependent signaling for transcriptional regulation of nitrate-responsive genes. Binds specifically to the DNA sequence motif 5'-GAATC-3' or 5'-GAATATTC-3'. Represses the activity of its own promoter trough binding to these motifs. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by nitrate. {ECO:0000269|PubMed:23324170}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004954868.3 | 1e-102 | transcription factor NIGT1 | ||||
Swissprot | Q6Z869 | 1e-84 | NIGT1_ORYSJ; Transcription factor NIGT1 | ||||
TrEMBL | A0A0A9G3F3 | 1e-106 | A0A0A9G3F3_ARUDO; Uncharacterized protein | ||||
STRING | Si019945m | 1e-103 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6470 | 37 | 54 |
Publications ? help Back to Top | |||
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