PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc02216.1.g00050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 202aa MW: 22607.2 Da PI: 9.4373 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.5 | 9.1e-11 | 59 | 101 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k+ rr+++NReAAr+sR+RKka++++Le +L + ++L+ Zmw_sc02216.1.g00050.1.sm.mkhc 59 QKVLRRLAQNREAARKSRLRKKAYVQQLESSKLKLASLEQELQ 101 5899*************************96666666555555 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-8 | 55 | 103 | No hit | No description |
SMART | SM00338 | 2.0E-8 | 56 | 119 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.289 | 58 | 102 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.19E-7 | 60 | 103 | No hit | No description |
Pfam | PF00170 | 9.2E-8 | 60 | 101 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 63 | 78 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.7E-21 | 142 | 200 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 202 aa Download sequence Send to blast |
MADANSRTDT SIVLDTDDKD QRDANVRLGS LKLENGHSGA AMASNSSDRS DRSDKPMDQK 60 VLRRLAQNRE AARKSRLRKK AYVQQLESSK LKLASLEQEL QKARQQGIFI SSSGDQTHSM 120 SGNGAMTFDL EYARWQEEQN KQINELRAAV NAHASDSDLR LIVDGIMAHY DEIFRQKGVA 180 AKADVFHILS GMWKTPAERL TT |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Plays a negative role in rice basal defense responses to the bacterial blight pathogen Xanthomomas oryzae pv. oryzae (Xoo). May function in both positive and negative regulation of rice defense genes. Binds DNA in vitro (PubMed:16045470). Acts as transcriptional activator when bound to NPR1/NH1 in vitro (PubMed:22353606). Binds to the promoter sequence of CRK10 in vitro (PubMed:27176732). {ECO:0000269|PubMed:16045470, ECO:0000269|PubMed:22353606, ECO:0000269|PubMed:27176732}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020199874.1 | 1e-118 | transcription factor TGA2.2 isoform X1 | ||||
Swissprot | Q7X993 | 1e-110 | TGA21_ORYSJ; Transcription factor TGA2.1 | ||||
TrEMBL | A0A446QUZ9 | 1e-117 | A0A446QUZ9_TRITD; Uncharacterized protein | ||||
TrEMBL | A0A453I7D4 | 1e-117 | A0A453I7D4_AEGTS; Uncharacterized protein | ||||
TrEMBL | W5EIP1 | 1e-117 | W5EIP1_WHEAT; Uncharacterized protein | ||||
STRING | Traes_4AS_6EDD5ACF7.2 | 1e-118 | (Triticum aestivum) | ||||
STRING | Traes_4DL_73DC40D7B.1 | 1e-118 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP42268 | 3 | 3 |
Publications ? help Back to Top | |||
---|---|---|---|
|