PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02163.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 446aa MW: 46369.9 Da PI: 8.2124

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02163.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	75.3	7.9e-24	371	433	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK++e+eeL +kv+eL++eN aLk el++lkk ++ +++e+ Zmw_sc02163.1.g00020.1.am.mkhc 371 ERELKRERRKQSNRESARRSRLRKQQECEELGRKVAELTTENNALKAELDNLKKACQDMEAEN 433 89*********************************************************9998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF16596	8.7E-7	238	348	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.9E-17	366	430	No hit	No description
Pfam	PF00170	4.3E-21	371	433	IPR004827	Basic-leucine zipper domain
SMART	SM00338	5.2E-21	371	435	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	13.047	373	436	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.75E-11	374	429	No hit	No description
CDD	cd14702	4.28E-21	376	427	No hit	No description
PROSITE pattern	PS00036	0	378	393	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence Send to blast
RRPHRTLASS ERLFAVLSFL ARRFPTPPPG SLTAGERVAV SLCPPPHPPP RPPPVPSSPL 60 VPEPAGISRS RLLPPPSPIM ASSSDEQPKP PEPPAAAGPA VVTATPQTHA EWAASLQAYY 120 AAAGHPYAWP AQHLMAAAAA GATYGAPVPF PVYHPGAAAA YYAHASMAAV SALLLLRCSP 180 VSNWGNLGSV SWGFWSEFAA AVQGVPYPTA EAAAAEAAAA AVAEGKGKGK GGGTSPEKGS 240 SGAPSGEDAS QSGESGSDES SDTRDDDTDH KDSSAPKKRK SGNTSAEGEP SQAAVVCYPA 300 IESPFPMKGR SASKLPVSAP GRAALPNATS NLSAGMDLWS TSPALAVPAV QGEASPGLAV 360 ARRDGATPLD ERELKRERRK QSNRESARRS RLRKQQECEE LGRKVAELTT ENNALKAELD 420 NLKKACQDME AENSRLMVSA WNLTII

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence Send to blast

RRPHRTLASS ERLFAVLSFL ARRFPTPPPG SLTAGERVAV SLCPPPHPPP RPPPVPSSPL  60
VPEPAGISRS RLLPPPSPIM ASSSDEQPKP PEPPAAAGPA VVTATPQTHA EWAASLQAYY  120
AAAGHPYAWP AQHLMAAAAA GATYGAPVPF PVYHPGAAAA YYAHASMAAV SALLLLRCSP  180
VSNWGNLGSV SWGFWSEFAA AVQGVPYPTA EAAAAEAAAA AVAEGKGKGK GGGTSPEKGS  240
SGAPSGEDAS QSGESGSDES SDTRDDDTDH KDSSAPKKRK SGNTSAEGEP SQAAVVCYPA  300
IESPFPMKGR SASKLPVSAP GRAALPNATS NLSAGMDLWS TSPALAVPAV QGEASPGLAV  360
ARRDGATPLD ERELKRERRK QSNRESARRS RLRKQQECEE LGRKVAELTT ENNALKAELD  420
NLKKACQDME AENSRLMVSA WNLTII

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	387	393	RRSRLRK
2	387	394	RRSRLRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001105491.1	1e-144	maize Em binding protein-1a
TrEMBL	A0A3B6AY42	1e-147	A0A3B6AY42_WHEAT; Uncharacterized protein
TrEMBL	A0A446KY93	1e-147	A0A446KY93_TRITD; Uncharacterized protein
STRING	Traes_2BL_245DDBC7B.2	1e-141	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2160	36	92