PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02112.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 383aa MW: 41662.2 Da PI: 9.5728

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02112.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.8	3.2e-10	118	155	4	41
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 kr +r NR +A+rsR RK+++i eLe+ v +L+ Zmw_sc02112.1.g00070.1.am.mk 118 PKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQVD 155 5999****************************999865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.3E-5	115	173	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.1E-10	119	154	No hit	No description
Pfam	PF00170	2.0E-8	119	154	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.1E-9	119	160	No hit	No description
CDD	cd14703	2.12E-16	120	153	No hit	No description
PROSITE pattern	PS00036	0	122	137	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence Send to blast
MQCVASWLRL SSCSKSLVPC DPPISVAPAD GGAGEFDRLD DDQLMSMFPD EGGSASAPGS 60 ENGGSDSDGR DKRPAAAAVG AGKECADERN GNVVAKEPVP GQDAAATVAA PTELIRDPKR 120 VKRILANRQS AQRSRVRKLQ YISELERSVT TLQVDRLHML APNSNSVASE NPCACVVWSR 180 GGRRPFAWQP RDATHLASSS PELVAGSSSS RVPSPVHVRC LYPRMRCERE CESAGGTRAL 240 PPSARKTDLD DLLVSRPRRV GVFIIRGEAR HMELARYRSQ RFLRGPVSGL LARANEVSVL 300 SPRVAFLDQQ RTILTVGNSH LKQRIAALAQ DKIFKDAHQE ALKKEIERLR QVYEQQNLKM 360 SAGAPASEHG PPPPVRAEKE LMS

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence Send to blast

MQCVASWLRL SSCSKSLVPC DPPISVAPAD GGAGEFDRLD DDQLMSMFPD EGGSASAPGS  60
ENGGSDSDGR DKRPAAAAVG AGKECADERN GNVVAKEPVP GQDAAATVAA PTELIRDPKR  120
VKRILANRQS AQRSRVRKLQ YISELERSVT TLQVDRLHML APNSNSVASE NPCACVVWSR  180
GGRRPFAWQP RDATHLASSS PELVAGSSSS RVPSPVHVRC LYPRMRCERE CESAGGTRAL  240
PPSARKTDLD DLLVSRPRRV GVFIIRGEAR HMELARYRSQ RFLRGPVSGL LARANEVSVL  300
SPRVAFLDQQ RTILTVGNSH LKQRIAALAQ DKIFKDAHQE ALKKEIERLR QVYEQQNLKM  360
SAGAPASEHG PPPPVRAEKE LMS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription regulator. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002456373.1	1e-51	basic leucine zipper 6
Swissprot	Q5JMK6	7e-45	BZP06_ORYSJ; Basic leucine zipper 6
TrEMBL	C5XK77	2e-50	C5XK77_SORBI; Uncharacterized protein
STRING	Sb03g034950.1	4e-51	(Sorghum bicolor)

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]