PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02107.1.g00100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 21160.4 Da PI: 7.4115 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.7 | 1.6e-14 | 84 | 128 | 1 | 49 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 + y+GVr++ +g Wv+eIr+p++ + r++lg++ ta++Aa a+ ++ Zmw_sc02107.1.g00100.1.sm.mk 84 PSYRGVRRRD-WGVWVSEIREPRK---KSRIWLGTYPTAKMAASARRRC 128 57*****988.**********843...6****************99876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.43E-15 | 84 | 124 | No hit | No description |
Pfam | PF00847 | 7.5E-9 | 84 | 125 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.8E-19 | 85 | 124 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.291 | 85 | 124 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.54E-13 | 85 | 127 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 2.8E-12 | 85 | 142 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-8 | 86 | 97 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-8 | 108 | 124 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MEIAGELRAP ITPSSSSSSS NSSSSCAIDT TVTQVLLNAK HDSKTSKQRR RSYSPPAPGS 60 SSGRRQPEHD AAGRRITGCA GRHPSYRGVR RRDWGVWVSE IREPRKKSRI WLGTYPTAKM 120 AASARRRCDD SEENTAAFFE CLPDLLLDLR DGLMWSADVW ADDAASSVAE ECNDGGDDVF 180 GGVHLWPDQF WT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008356544.1 | 7e-21 | ethylene-responsive transcription factor ERF034-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP48501 | 2 | 3 |