PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02103.1.g00090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 559aa MW: 61766.7 Da PI: 10.6722 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 157.3 | 6.5e-49 | 22 | 158 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.........kvkaeekewyfFskrdkkyatgk 72 lppGfrF P+deelv++yL kkv++++ ++ evd++ ePw+Lp ++k + +ewyfFs rd+kyatg+ Zmw_sc02103.1.g00090.1.am.mk 22 LPPGFRFYPSDEELVCHYLYKKVANERAAQ-GTLVEVDLHAREPWELPGeplpvlvyhAAKLTASEWYFFSFRDRKYATGS 101 79*************************776.78**************955899998764445778**************** PP NAM 73 rknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 r+nratk+gyWkatgkd+ev s ++++vg++ktLvfy+grap+g+k+ Wvmhe+rl Zmw_sc02103.1.g00090.1.am.mk 102 RTNRATKTGYWKATGKDREVRSPaTRAVVGMRKTLVFYQGRAPNGVKSCWVMHEFRL 158 **********************977788***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.79E-54 | 19 | 168 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.066 | 22 | 208 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.0E-27 | 23 | 158 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.79E-54 | 196 | 208 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 559 aa Download sequence Send to blast |
MDRQADRGRQ RGMGLREIES TLPPGFRFYP SDEELVCHYL YKKVANERAA QGTLVEVDLH 60 AREPWELPGE PLPVLVYHAA KLTASEWYFF SFRDRKYATG SRTNRATKTG YWKATGKDRE 120 VRSPATRAVV GMRKTLVFYQ GRAPNGVKSC WVMHEFRLDS PHSPPKVTFR RQTDQLLDIL 180 PLHNTVSNSV GVTRYLQEDW VLCRVFQKRK DSEQEAAGSS RAVVPLDQPV LEALTDHQTA 240 GSPVGFAPPQ DNNALLSAAI WQCGSVLDHQ YPQEVSSSPM MTMTGLVGSR VVGDGCGFFY 300 DAGFEDTAVN IAGGGFPQGP ALDSFPAWDG PLQPSASQFP HDFRRLPVPV APTRPTGVRP 360 RYRKATARTR PQELGSLGAR PDRDGPWRQR GRGGTSSARA SVHSSTRKHH WTGRGPGRPE 420 PPPRQRDNPG GPSPSADTEY RDPRATVTRA GPRPRRIDRV KRAQRPVKAP RARPPGCLQV 480 LLPHSGLRAC CQRRPSPAVD GGHDRPRSRF PPAARGDSHR VVRALASSCL PTCPGASTGE 540 GNRARRVALM QSERCSSVE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 2e-41 | 13 | 214 | 7 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-41 | 13 | 214 | 7 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-41 | 13 | 214 | 7 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-41 | 13 | 214 | 7 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-41 | 13 | 214 | 7 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-41 | 13 | 214 | 7 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-41 | 13 | 214 | 7 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-41 | 13 | 214 | 7 | 174 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025824637.1 | 1e-130 | protein CUP-SHAPED COTYLEDON 1-like | ||||
TrEMBL | A0A2T7CXR4 | 1e-129 | A0A2T7CXR4_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Ga01251.1.p | 1e-128 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP697 | 38 | 166 |