PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02083.1.g00090.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 382aa MW: 41698.8 Da PI: 6.3016

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02083.1.g00090.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.1	7.1e-12	151	181	3	33
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 +lk rr+++NReAAr+sR+RKka+i++Le Zmw_sc02083.1.g00090.1.sm.mkhc 151 QLKTIRRLAQNREAARKSRLRKKAYIQQLES 181 6899*************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50217	8.646	151	195	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.6E-9	151	182	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.64E-7	153	186	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.3E-7	154	181	No hit	No description
PROSITE pattern	PS00036	0	156	171	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	3.8E-30	233	306	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence Send to blast
MREISNSSSH PRQDPCVLAS YGFHGTTGNS FDQAGSTYFG ELEEALMHEV ATIRTQKAAA 60 TSMAHDGDTT SFPIAAATAT ATAGPLPPTL DIFPSWPLRS FVHAHKEYSN VTGGSTDSES 120 SSKNSSEHSS DQQVAAATSM ASQLDQVPQL QLKTIRRLAQ NREAARKSRL RKKAYIQQLE 180 SSKLKLAQME QDVQRARARG LLLGGAPGAN TSSGAALFDM EHARWLEDHA RRMAELHRAL 240 HAHLQDGELR ALVDDTLTHH DELFRLKAVA TKADVFHLIT GVWTSPAERC FLWMGGFRPS 300 DLLRTLLPQL DPLTEQQVID ICNLQQSSQQ AEEALSQGLE QLHQSLADTM AGGSLIEDAN 360 MSFMGQMALA LGKLSNLEGF VI

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence Send to blast

MREISNSSSH PRQDPCVLAS YGFHGTTGNS FDQAGSTYFG ELEEALMHEV ATIRTQKAAA  60
TSMAHDGDTT SFPIAAATAT ATAGPLPPTL DIFPSWPLRS FVHAHKEYSN VTGGSTDSES  120
SSKNSSEHSS DQQVAAATSM ASQLDQVPQL QLKTIRRLAQ NREAARKSRL RKKAYIQQLE  180
SSKLKLAQME QDVQRARARG LLLGGAPGAN TSSGAALFDM EHARWLEDHA RRMAELHRAL  240
HAHLQDGELR ALVDDTLTHH DELFRLKAVA TKADVFHLIT GVWTSPAERC FLWMGGFRPS  300
DLLRTLLPQL DPLTEQQVID ICNLQQSSQQ AEEALSQGLE QLHQSLADTM AGGSLIEDAN  360
MSFMGQMALA LGKLSNLEGF VI

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025809311.1	0.0	transcription factor TGAL4-like isoform X2
Swissprot	Q53Q70	1e-161	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	A0A2T7E565	0.0	A0A2T7E565_9POAL; Uncharacterized protein
STRING	Si026421m	0.0	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]