PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02047.1.g00160.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 263aa MW: 28833.2 Da PI: 4.7454

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02047.1.g00160.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	32.2	3.2e-10	10	91	2	75
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvka..eekewyfFskrdkkyatgk....rkn 75 pG+rF+Pt ++v +yL + ++g++++ + + i+++ iy+ eP L k++ +++ +fF++ ++++++ r+ Zmw_sc02047.1.g00160.1.am.mk 10 CPGIRFQPTPRDVVAYYLPRLIAGEQVHPAICplIHRTSIYTDEPGVLAGKFDPtpVKDDRFFFTTVVRQKPQNGrgwdRQD 91 79**********************55444335************8544332234477999988887775442333333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	5.62E-10	7	90	IPR003441	NAC domain
PROSITE profile	PS51005	10.486	9	157	IPR003441	NAC domain
Pfam	PF02365	2.4E-5	11	96	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence Send to blast
MAKPIKSALC PGIRFQPTPR DVVAYYLPRL IAGEQVHPAI CPLIHRTSIY TDEPGVLAGK 60 FDPTPVKDDR FFFTTVVRQK PQNGRGWDRQ DRRAPAAKEY SCARSVKDAV VGDKECVFCR 120 VYVSPNAATN NKKKPPPLII DAATPPPQFL ASPSSKRIEA APESSIGSPS SPTSPRPCTP 180 RPPCSPAHGS PWSPTYEPAE EEETAMGPEN PAAAVDNDFD DLINNFKVSL PADAPDADEY 240 DERFSCSFEE LLNVDEEEQG HQD

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1832	27	99