PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc02040.1.g00090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | EIL | ||||||||
Protein Properties | Length: 665aa MW: 73628.2 Da PI: 7.4261 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 508.2 | 3.8e-155 | 71 | 459 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaa....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgii 77 eel++rmw+d+m+lkrl+e ++ + +d+ + g++k ++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgii Zmw_sc02040.1.g00090.1.am.mk 71 EELERRMWRDRMKLKRLRELQQTRGKDQASGgsggDGSSKPRQSQEQARRKKMSRAQDGILKYMLKMMEVCRAQGFVYGII 151 8*******************9999988877688877899999*************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS- CS EIN3 78 pekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdpp 158 pekgkpv+gasd+LraWWkekv+fdrngpaai+kyqa+n+i+++es+l + + +++hsl+elqDTtlgSLLsalmqhcdpp Zmw_sc02040.1.g00090.1.am.mk 152 PEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADNAIPGSESELAS-GAASPHSLQELQDTTLGSLLSALMQHCDPP 231 ************************************************66.****************************** PP TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT-- CS EIN3 159 qrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkms 239 qrr+plekgv+pPWWPtG+e+ww+elg++k+qg+ppykkphdlkkawkvsvLtavikhmsp+ie+ir+l+rqsk+lqdkm+ Zmw_sc02040.1.g00090.1.am.mk 232 QRRYPLEKGVPPPWWPTGDEEWWPELGIPKEQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMT 312 ********************************************************************************* PP SHHHHHHHHHHTTTTT-S--XXXXXX...XXXX...XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX............ CS EIN3 240 akesfallsvlnqeekecatvsahss...slrk...qspkvtlsceqkedvegkkeskikhvqavktta............ 302 ake ++l+v +qee+++ ++++ + s+ ++ ++++s+ +++dv+ ++ k ++ ++kt+ Zmw_sc02040.1.g00090.1.am.mk 313 AKEISTWLAVAKQEEELYMKLHPGARpptST-GgiaSAISLNASS-SEYDVDLAEDCKGDEAGNQKTAVsdptafnlgaai 391 ***********************94433332.2332445555554.599***8888888888888887799999******* PP ................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS EIN3 303 ................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqney 354 +++++ kr+++ s + + ++ ++tc++ q+++s+ +f d+n++++++y Zmw_sc02040.1.g00090.1.am.mk 392 lndkfllptpmkeetaDVDFTPKRNAPASAEPELMLNNRVYTCNNVQCPHSDCGYGFLDRNARNSHQY 459 *************************987765555555567**************************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 5.6E-132 | 71 | 327 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 5.6E-74 | 201 | 335 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 6.8E-61 | 206 | 331 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 665 aa Download sequence Send to blast |
MGGSLMMDQS MAFPGQNGAG VEKNLGFGPL MSQTSSGEQC LMGEGDLVDP PPDSFPDAGE 60 DDSDDDVEDI EELERRMWRD RMKLKRLREL QQTRGKDQAS GGSGGDGSSK PRQSQEQARR 120 KKMSRAQDGI LKYMLKMMEV CRAQGFVYGI IPEKGKPVSG ASDNLRAWWK EKVRFDRNGP 180 AAIAKYQADN AIPGSESELA SGAASPHSLQ ELQDTTLGSL LSALMQHCDP PQRRYPLEKG 240 VPPPWWPTGD EEWWPELGIP KEQGPPPYKK PHDLKKAWKV SVLTAVIKHM SPDIEKIRRL 300 VRQSKCLQDK MTAKEISTWL AVAKQEEELY MKLHPGARPP TSTGGIASAI SLNASSSEYD 360 VDLAEDCKGD EAGNQKTAVS DPTAFNLGAA ILNDKFLLPT PMKEETADVD FTPKRNAPAS 420 AEPELMLNNR VYTCNNVQCP HSDCGYGFLD RNARNSHQYT CKYNDPLSQS AENKPPPAPP 480 QVFPATFNQP NQSLNNLDFN LPMDGQRSIA ELMNMYDNNF MNKTIGSDSH LGLLSRVVVQ 540 CPGTDSEDGR MDHCLKEKGK WARPSWPPTR LPESNGRDCE RTRVHRRGAE GSPAPLERVK 600 SYPVESATRA LLLPAWFFRP VTTRSAPIPT RRGGILIPHV RSRASAFRAV GECNRVACQR 660 AYVLA |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-72 | 204 | 335 | 1 | 132 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-72 | 204 | 335 | 1 | 132 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:30002253}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Induced by wounding. {ECO:0000269|PubMed:19798512}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_004984528.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | Q8W3M0 | 0.0 | EIL1B_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1b | ||||
TrEMBL | K4A6W1 | 0.0 | K4A6W1_SETIT; Uncharacterized protein | ||||
STRING | Si034617m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP638 | 38 | 168 |
Publications ? help Back to Top | |||
---|---|---|---|
|